RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 KIAA1522Q9P206 1035 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 LHX3Q9UBR4 397 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 PRKAG3Q9UGI9 489 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SLC2A6Q9UGQ3 507 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 ZMYM5Q9UJ78 669 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SMG5Q9UPR3 1016 aaKnown RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 PSAT1Q9Y617 370 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 CHD5Q8TDI0 1954 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 HMX2A2RU54 273 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 FAM47DPA6NHR8 397 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 GOLGA8RI6L899 631 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 K7ERQ8 282 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 TYROBPO43914 113 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 KRT38O76015 456 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 F12P00748 615 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 PENKP01210 267 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 EPOP01588 193 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 CES1P23141 567 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 GBP2P32456 591 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 SCNN1BP51168 640 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 PLK1P53350 603 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 SLC18A1P54219 525 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 LRRC14Q15048 493 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 INO80DQ53TQ3 878 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 HSP90AA5PQ58FG0 334 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 TEDDM1Q5T9Z0 273 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 COL13A1Q5TAT6 717 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 ARMC3Q5W041 872 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 ESRP1Q6NXG1 681 aaKnown RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 SH2D5Q6ZV89 423 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 KCNMB4Q86W47 210 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 ARID3BQ8IVW6 561 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 BANPQ8N9N5 519 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 DENND1AQ8TEH3 1009 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 MTBPQ96DY7 904 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 TRIB3Q96RU7 358 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 AGAP2Q99490 1192 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 C2orf49Q9BVC5 232 aaPredicted RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 LINC00597Q9H2U6 94 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 RABEP2Q9H5N1 569 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 SLC28A3Q9HAS3 691 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 MLXIPLQ9NP71 852 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 IARS2Q9NSE4 1012 aaKnown RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 TREX1Q9NSU2 369 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 DZANK1Q9NVP4 752 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 WNT6Q9Y6F9 365 aa10.42□□□□□ -0.74
ATRX-216ENST00000624403 HELZP42694 1942 aaKnown RBP10.42□□□□□ -0.74
ATRX-216ENST00000624403 HEATR9A2RTY3 570 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 NEDD8-MDP1E9PL57 170 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 RFPL1O75677 317 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 NDST3O95803 873 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 MT-CO1P00395 513 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 FGF1P05230 155 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 F7P08709 466 aaPredicted RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 HLA-DPA1P20036 260 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 CA4P22748 312 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 CNTFP26441 200 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 WEE1P30291 646 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 RPA3P35244 121 aaPredicted RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 GP5P40197 560 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 CCNFP41002 786 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 ARCN1P48444 511 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 SEC24CP53992 1094 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 WDR4P57081 412 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 RHOAP61586 193 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 SLC18A2Q05940 514 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 GALNT3Q14435 633 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 PLEKHG6Q3KR16 790 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 PITRM1Q5JRX3 1037 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 RARS2Q5T160 578 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 ATXN7L2Q5T6C5 722 aaPredicted RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 TSTD2Q5T7W7 516 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 GRTP1Q5TC63 336 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 MROH9Q5TGP6 573 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 PDPK2PQ6A1A2 396 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 RETSATQ6NUM9 610 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 NCEH1Q6PIU2 408 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 TIFABQ6ZNK6 161 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 STRA8Q7Z7C7 330 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 IRF7Q92985 503 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 ATP2A3Q93084 1043 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 ALKBH8Q96BT7 664 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 MRPL38Q96DV4 380 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 RSPRY1Q96DX4 576 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 LRRC3BQ96PB8 259 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 CDCA3Q99618 268 aaPredicted RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 CPNE1Q99829 537 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 BBS2Q9BXC9 721 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 EPN3Q9H201 632 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 IGFLR1Q9H665 355 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 SPHK2Q9NRA0 654 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 ABCB8Q9NUT2 735 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 TBC1D14Q9P2M4 693 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 GMPR2Q9P2T1 348 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 INTS6Q9UL03 887 aaKnown RBP10.41□□□□□ -0.74
ATRX-216ENST00000624403 CHKBQ9Y259 395 aa10.41□□□□□ -0.74
ATRX-216ENST00000624403 ATG2AQ2TAZ0 1938 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms