RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 RBBP8Q99708 897 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 POLR1EQ9GZS1 481 aaKnown RBP18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 MKS1Q9NXB0 559 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 MYOFQ9NZM1 2061 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 ANKRD36A6QL64 1941 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 LOC285095A0A1B0GVY8 99 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 LINC01553A4QN01 128 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 RFPL2O75678 378 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 GABRB3P28472 473 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 MZF1P28698 734 aaPredicted RBP18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 SIRPB2Q5JXA9 342 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 RNF219Q5W0B1 726 aaPredicted RBP18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 SETD3Q86TU7 594 aaPredicted RBP18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 ZNF599Q96NL3 588 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 CORO1BQ9BR76 489 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 SMG9Q9H0W8 520 aaKnown RBP18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 PRKAG3Q9UGI9 489 aa18.64■□□□□ 0.57
PCDHB2-202ENST00000622947 TBL1XO60907 577 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 VAPBO95292 243 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 C1RP00736 705 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 CLCN4P51793 760 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 OXCT1P55809 520 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 ARF5P84085 180 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 ZNF235Q14590 738 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 GRTP1Q5TC63 336 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 ALG1LQ6GMV1 187 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 FSTL4Q6MZW2 842 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 CMC1Q7Z7K0 106 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 DCLK2Q8N568 766 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 EXOC2Q96KP1 924 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 RAB3IPQ96QF0 476 aaPredicted RBP18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 MGME1Q9BQP7 344 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 SLC46A2Q9BY10 475 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 VPS11Q9H270 941 aa18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 MTO1Q9Y2Z2 717 aaKnown RBP18.63■□□□□ 0.57
PCDHB2-202ENST00000622947 CBX4O00257 560 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 MAP3K13O43283 966 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 SNAP91O60641 907 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 GLUD1P00367 558 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CRHR1P34998 444 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 PGGT1BP53609 377 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 KLC1Q07866 573 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CYTH1Q15438 398 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CCDC149Q6ZUS6 474 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 RNF135Q8IUD6 432 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 FAM217AQ8IXS0 508 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 RBM12BQ8IXT5 1001 aaKnown RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 PPHLN1Q8NEY8 458 aaKnown RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 MRPS31Q92665 395 aaKnown RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 MECRQ9BV79 373 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 LZTS1Q9Y250 596 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 E2F8A0AVK6 867 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 PRKCGP05129 697 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CKMP06732 381 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 MYL4P12829 197 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 MAGEA8P43361 318 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 SERPINH1P50454 418 aaKnown RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 LIMK2P53671 638 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 SEPT6Q14141 434 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 SEPT7Q16181 437 aaKnown RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CES4AQ5XG92 561 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 FAM109BQ6ICB4 259 aaPredicted RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 TMEM154Q6P9G4 183 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 LINGO4Q6UY18 593 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 DENND6AQ8IWF6 608 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 BBS7Q8IWZ6 715 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CARNMT1Q8N4J0 409 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 PNPLA1Q8N8W4 532 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 LRRC8CQ8TDW0 803 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 TCEAL4Q96EI5 215 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 PSKH2Q96QS6 385 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 PITPNM3Q9BZ71 974 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 CAB39LQ9H9S4 337 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 MRM3Q9HC36 420 aaKnown RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 UBA2Q9UBT2 640 aaPredicted RBP18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 EMCNQ9ULC0 261 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 OR51B4Q9Y5P0 310 aa18.62■□□□□ 0.57
PCDHB2-202ENST00000622947 GRXCR1A8MXD5 290 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 GRM6O15303 877 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 LATS1O95835 1130 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 GSRP00390 522 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 CALB2P22676 271 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 SP100P23497 879 aaPredicted RBP18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 SKIV2L2P42285 1042 aaKnown RBP18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 MAGEA12P43365 314 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 SERPINB4P48594 390 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 SLC7A9P82251 487 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 DLG2Q15700 870 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 PDPK2PQ6A1A2 396 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 C16orf46Q6P387 395 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 RIN3Q8TB24 985 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 PHOSPHO2Q8TCD6 241 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 PTCD2Q8WV60 388 aaKnown RBP18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 TRAPPC9Q96Q05 1148 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 EMILIN2Q9BXX0 1053 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 MUC3BQ9H195 1237 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 VCXQ9H320 206 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 RNPEPL1Q9HAU8 725 aa18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.61■□□□□ 0.57
PCDHB2-202ENST00000622947 CFAP97Q9P2B7 532 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms