RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SLC14A1Q13336 389 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 HNRNPDQ14103 355 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 TFDP2Q14188 446 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 LLGL1Q15334 1064 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 UGP2Q16851 508 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 TMEM259Q4ZIN3 620 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 SLC9A4Q6AI14 798 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 SPOCD1Q6ZMY3 1216 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 ERMP1Q7Z2K6 904 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 CCDC13Q8IYE1 715 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 PGBD5Q8N414 524 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 PLD5Q8N7P1 536 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 MFSD2AQ8NA29 543 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 KIAA1524Q8TCG1 905 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 LRRN4Q8WUT4 740 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 VOPP1Q96AW1 172 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 HDAC11Q96DB2 347 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 KLHDC7BQ96G42 594 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 RBM41Q96IZ5 413 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 NUDCD1Q96RS6 583 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 MGME1Q9BQP7 344 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 POLR1EQ9GZS1 481 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 LACRTQ9GZZ8 138 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 TM7SF3Q9NS93 570 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 RBM22Q9NW64 420 aaKnown RBP eCLIP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 DTLQ9NZJ0 730 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 FNDC3AQ9Y2H6 1198 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
PCDHGC3-208ENST00000622836 SPTBN2O15020 2390 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 H0Y8X5 98 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 TM4SF5O14894 197 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PPP1R12AO14974 1030 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 AREL1O15033 823 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PJA2O43164 708 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 NRDCO43847 1150 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 DFNA5O60443 496 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 MMP20O60882 483 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 TM7SF2O76062 418 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PRKCGP05129 697 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 CCNB1P14635 433 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 ITIH2P19823 946 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 CDKN2BP42772 138 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 CTSKP43235 329 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 CLDN2P57739 230 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 NXPH1P58417 271 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 OVGP1Q12889 678 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 SLC10A2Q12908 348 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 SUZ12Q15022 739 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PDK1Q15118 436 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 TFDP3Q5H9I0 405 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PRAMEF14Q5SWL7 426 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PSAPL1Q6NUJ1 521 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 NPNTQ6UXI9 565 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 BZW1Q7L1Q6 419 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 IQCHQ86VS3 1027 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 KATNAL2Q8IYT4 538 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 RCOR2Q8IZ40 523 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 DEFB124Q8NES8 71 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 SETD7Q8WTS6 366 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 TSGA13Q96PP4 275 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 LGMNQ99538 433 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 SEMA3CQ99985 751 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 C1QTNF7Q9BXJ2 289 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 NOD2Q9HC29 1040 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 SEPT10Q9P0V9 454 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 ATP8A1Q9Y2Q0 1164 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 DCHS1Q96JQ0 3298 aa14.09□□□□□ -0.15
PCDHGC3-208ENST00000622836 DOCK9Q9BZ29 2069 aa14.08□□□□□ -0.15
PCDHGC3-208ENST00000622836 A0A1W2PQ67 120 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 TSPAN11A1L157 253 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 GOLGA6L3A6NEY3 463 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 A6NNZ2 444 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 FPGTO14772 594 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 SPINT1O43278 529 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 CST8O60676 142 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 SOCS5O75159 536 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 KCNK5O95279 499 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 CPP00450 1065 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 THEGLP0DJG4 465 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 KRT10P13645 584 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 NFKBIAP25963 317 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 MARCKSL1P49006 195 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 ARRB1P49407 418 aaPredicted RBP14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 IL9RQ01113 521 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 SEMG2Q02383 582 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 FGL2Q14314 439 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 RALGPS1Q5JS13 557 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 CCDC181Q5TID7 509 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 PTAR1Q7Z6K3 402 aaPredicted RBP14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 ZSWIM9Q86XI8 627 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 SYCE1Q8N0S2 351 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 TEX26Q8N6G2 289 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 TMEM145Q8NBT3 493 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 CCDC112Q8NEF3 446 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 EXD1Q8NHP7 514 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 MAML1Q92585 1016 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 KRT35Q92764 455 aa14.08□□□□□ -0.16
PCDHGC3-208ENST00000622836 ELF4Q99607 663 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms