RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 C8orf4Q9NR00 106 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 UCKL1Q9NWZ5 548 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 VANGL2Q9ULK5 521 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 TMCC3Q9ULS5 477 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 PSAT1Q9Y617 370 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 A0A0A0MRY4 1105 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 A0A1W2PPW3 197 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 E2F8A0AVK6 867 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 SDR42E2A6NKP2 422 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 JRKO75564 520 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 C8BP07358 591 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 SERPINA6P08185 405 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 LMO2P25791 158 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 PTGS2P35354 604 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 SNX16P57768 344 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 CDKL1Q00532 357 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 GNA12Q03113 381 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 DGKDQ16760 1214 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 KIZQ2M2Z5 673 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 IGSF11Q5DX21 431 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 PPM1JQ5JR12 505 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 RABGAP1LQ5R372 815 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 TEDDM1Q5T9Z0 273 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 MBLAC2Q68D91 279 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ANKRD26P1Q6NSI1 321 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 CES3Q6UWW8 571 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 IDO2Q6ZQW0 420 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 SLC26A9Q7LBE3 791 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ARCQ7LC44 396 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 SPATA13Q96N96 652 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 CLSTN3Q9BQT9 956 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 GCOM2Q9BZD3 368 aaPredicted RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 RPF2Q9H7B2 306 aaKnown RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 PLEKHA5Q9HAU0 1116 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 POLHQ9Y253 713 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 M0QX08 132 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 TAF4O00268 1085 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 GPC4O75487 556 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 FGF3P11487 239 aaPredicted RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 ANO4Q32M45 955 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 FGD3Q5JSP0 725 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 AGMOQ6ZNB7 445 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ATG14Q6ZNE5 492 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 ZDHHC17Q8IUH5 632 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 PGLYRP2Q96PD5 576 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 FAM124BQ9H5Z6 455 aaPredicted RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 GNEQ9Y223 722 aaKnown RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 APOBEC2Q9Y235 224 aaKnown RBP12.56□□□□□ -0.4
LITAF-221ENST00000622633 SCN1AP35498 2009 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 PTPRFP10586 1907 aa12.56□□□□□ -0.4
LITAF-221ENST00000622633 FAM172BPA6NC97 362 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 PLIN3O60664 434 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 CNTFP26441 200 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SLC1A6P48664 564 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ZNF618Q5T7W0 954 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ATAD3BQ5T9A4 648 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 TAPT1Q6NXT6 567 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ZCCHC8Q6NZY4 707 aaKnown RBP12.55□□□□□ -0.4
LITAF-221ENST00000622633 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 LYSMD3Q7Z3D4 306 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SETD3Q86TU7 594 aaPredicted RBP12.55□□□□□ -0.4
LITAF-221ENST00000622633 ZBTB46Q86UZ6 589 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 GPC2Q8N158 579 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ANKRD52Q8NB46 1076 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 PPP1R13LQ8WUF5 828 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 KBTBD7Q8WVZ9 684 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ARNTL2Q8WYA1 636 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 PNPOQ9NVS9 261 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 GJD2Q9UKL4 321 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 USP3Q9Y6I4 520 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SYNJ2BP-COX16A0A087WUM0 186 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ASB14A6NK59 587 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 OR5K4A6NMS3 321 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 FADS2P1A8MWK0 482 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 RNF103O00237 685 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 CXCL11O14625 94 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 MFSD11O43934 449 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SORBS2O94875 1100 aaKnown RBP12.55□□□□□ -0.4
LITAF-221ENST00000622633 BMP10O95393 424 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ERVK-10P10266 1014 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 HOXA11P31270 313 aaPredicted RBP12.55□□□□□ -0.4
LITAF-221ENST00000622633 ARL4AP40617 200 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 ADCYAP1R1P41586 468 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 CBX5P45973 191 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 BST2Q10589 180 aaKnown RBP12.55□□□□□ -0.4
LITAF-221ENST00000622633 TUBB3Q13509 450 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 INAVAQ3KP66 663 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms