RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MYO16Q9Y6X6 1858 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 SMIM31A0A1B0GVY4 71 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 EME2A4GXA9 379 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 MYADML2A6NDP7 307 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 H0YJX3 145 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC7A4O43246 635 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 DNAJA2O60884 412 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 PMPCBO75439 489 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 ENO3P13929 434 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 AKR1A1P14550 325 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 RHOQP17081 205 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 DPP6P42658 865 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 CHRNA4P43681 627 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 HSPA13P48723 471 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SERPINH1P50454 418 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 PGGT1BP53609 377 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 PSME3P61289 254 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TSPY1Q01534 308 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 CREB5Q02930 508 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRAP1Q12931 704 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 STX5Q13190 355 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 PTK2BQ14289 1009 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF460Q14592 562 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 ACAP2Q15057 778 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 PDCD2Q16342 344 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 LRRC36Q1X8D7 754 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 CNPY1Q3B7I2 92 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 C11orf91Q3C1V1 193 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 GRAMD1BQ3KR37 738 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 RARS2Q5T160 578 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 RBM20Q5T481 1227 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 THEMIS2Q5TEJ8 643 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 IRAK1BP1Q5VVH5 260 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM198Q66K66 360 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF470Q6ECI4 717 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 GDF6Q6KF10 455 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 FBXL19Q6PCT2 694 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 HACD2Q6Y1H2 254 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SPATA2LQ8IUW3 424 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC22A9Q8IVM8 553 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TEX26Q8N6G2 289 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SCAMP5Q8TAC9 235 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SPPL2BQ8TCT7 592 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC39A13Q96H72 371 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 UBXN10Q96LJ8 280 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 LRGUKQ96M69 825 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SERPINB11Q96P15 392 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM209Q96SK2 561 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 OLFM1Q99784 485 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRMOQ9BU70 441 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SPATA16Q9BXB7 569 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 FSD1LQ9BXM9 530 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 AGO3Q9H9G7 860 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRPC7Q9HCX4 862 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 PRDM5Q9NQX1 630 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 ACSS2Q9NR19 701 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 VPS45Q9NRW7 570 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 SUCOQ9UBS9 1254 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 IPO11Q9UI26 975 aaKnown RBP9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 HS3ST4Q9Y661 456 aa9.69□□□□□ -0.86
IGHV3-54-201ENST00000622166 DOCK4Q8N1I0 1966 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 MROH6A6NGR9 719 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 CAPN8A6NHC0 703 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 A8MT66 165 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 CFLARO15519 480 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 MGEA5O60502 916 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 IPO13O94829 963 aaKnown RBP9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 C8BP07358 591 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SMIM18P0DKX4 95 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC2A3P11169 496 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 HOXB8P17481 243 aaPredicted RBP9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 IMPDH1P20839 514 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 GRIA2P42262 883 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 RENBPP51606 427 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC5A3P53794 718 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 PKNOX1P55347 436 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 LRP8Q14114 963 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SEPT6Q14141 434 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 CSHL1Q14406 222 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 TLR1Q15399 786 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 HECTD2Q5U5R9 776 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 KLC3Q6P597 504 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 GK5Q6ZS86 529 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 LILRA2Q8N149 483 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 TMEM102Q8N9M5 508 aaPredicted RBP9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 HMGCLL1Q8TB92 370 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 SOCS4Q8WXH5 440 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 L3HYPDHQ96EM0 354 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 PPP1R36Q96LQ0 422 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 MRPL1Q9BYD6 325 aaKnown RBP9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRIM4Q9C037 500 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 UNC93B1Q9H1C4 597 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 MFSD1Q9H3U5 465 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 GSTO2Q9H4Y5 243 aa9.68□□□□□ -0.86
IGHV3-54-201ENST00000622166 NMUR1Q9HB89 426 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms