RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ASB2Q96Q27 587 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 MTG1Q9BT17 334 aaPredicted RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 MSTO1Q9BUK6 570 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 C1QTNF7Q9BXJ2 289 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 NARFLQ9H6Q4 476 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SYBUQ9NX95 663 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 FBXO40Q9UH90 709 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PCDHGB3Q9Y5G1 929 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SAC3D1A6NKF1 404 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 OR5K4A6NMS3 321 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CENPXA8MT69 81 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SGK1O00141 431 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 RAD51BO15315 384 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PHGDHO43175 533 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 TMEM63AO94886 807 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 KCNK2O95069 426 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CST3P01034 146 aaPredicted RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PGK2P07205 417 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SNRPAP09012 282 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PCNAP12004 261 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 BMP2P12643 396 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 BMP4P12644 408 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 IL1R2P27930 398 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC7A1P30825 629 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PPP5CP53041 499 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 TGFB2P61812 414 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 RHDQ02161 417 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 MERTKQ12866 999 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CEACAM7Q14002 265 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SQLEQ14534 574 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 BROXQ5VW32 411 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 GTF2IRD2BQ6EKJ0 949 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 DNAJC24Q6P3W2 148 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CYP20A1Q6UW02 462 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CCBE1Q6UXH8 406 aaPredicted RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SCARA5Q6ZMJ2 495 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CDHR3Q6ZTQ4 885 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 GTF2IRD2Q86UP8 949 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC26A11Q86WA9 606 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 IFNL1Q8IU54 200 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SCML4Q8N228 414 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 TDRD5Q8NAT2 981 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 TTLQ8NG68 377 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 OR6F1Q8NGZ6 308 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 RP9Q8TA86 221 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC35B2Q8TB61 432 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 ZFP90Q8TF47 636 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PHF10Q8WUB8 498 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 LRTOMTQ8WZ04 291 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CPT1BQ92523 772 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 NKD2Q969F2 451 aaPredicted RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 RIPOR3Q96MK2 946 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 CDRT15Q96T59 188 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 C20orf27Q9GZN8 174 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 PNPLA8Q9NP80 782 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 FARSBQ9NSD9 589 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SMOXQ9NWM0 555 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 ADPRHL2Q9NX46 363 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 MAP3K20Q9NYL2 800 aaKnown RBP7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC9A2Q9UBY0 812 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 ATP6V1HQ9UI12 483 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 FZD1Q9UP38 647 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
TRIM49B-202ENST00000622138 C12orf71A8MTZ7 269 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM49D1C9J1S8 452 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 UGT2B11O75310 529 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 UPK1BO75841 260 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 NDST3O95803 873 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PIGRP01833 764 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 SUPT20HL2P0C7V6 817 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 NCF2P19878 526 aaPredicted RBP7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 CSTF2P33240 577 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 CRHR1P34998 444 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 GRK3P35626 688 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 DDOSTP39656 456 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 EIF2DP41214 584 aaKnown RBP7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PSMD8P48556 350 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 HCAR3P49019 387 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 MYL6P60660 151 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 MS4A2Q01362 244 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 CLCQ05315 142 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 BNIP2Q12982 314 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PEX6Q13608 980 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 NFE2L1Q14494 772 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 DGUOKQ16854 277 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 LEXMQ3ZCV2 418 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 SUPT20HL1Q3ZLR7 823 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 YIF1BQ5BJH7 314 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 KCNT1Q5JUK3 1230 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 BRMS1LQ5PSV4 323 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 DENND1BQ6P3S1 775 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 MAVSQ7Z434 540 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 SLCO6A1Q86UG4 719 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 CAMK1DQ8IU85 385 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 RHPN2Q8IUC4 686 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 LYSMD2Q8IV50 215 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 BRSK2Q8IWQ3 736 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms