RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 F9P00740 461 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 IGLV3-27P01718 113 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 FAM228BP0C875 321 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 MYBL1P10243 752 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 PYGMP11217 842 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 GPD1P21695 349 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 SDC4P31431 198 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 CCR1P32246 355 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 MLLT6P55198 1093 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 GSCP56915 257 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 CDO1Q16878 200 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 SLC25A52Q3SY17 297 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 C1orf228Q6PIY5 440 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 WDR59Q6PJI9 974 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 ETV3LQ6ZN32 361 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 BMP8AQ7Z5Y6 402 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 JOSD2Q8TAC2 188 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 OLIG1Q8TAK6 271 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 UHMK1Q8TAS1 419 aaKnown RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 PHOSPHO1Q8TCT1 267 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 DDI1Q8WTU0 396 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 CD101Q93033 1021 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 CHFRQ96EP1 664 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 TMA16Q96EY4 203 aaKnown RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 SLC39A13Q96H72 371 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 VCPIP1Q96JH7 1222 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 MCEEQ96PE7 176 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 XPO6Q96QU8 1125 aaKnown RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 NPY6RQ99463 290 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 CHP1Q99653 195 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 P2RY13Q9BPV8 354 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 LRFN3Q9BTN0 628 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 WDCPQ9H6R7 721 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 NHEJ1Q9H9Q4 299 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 PARVAQ9NVD7 372 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 PLK2Q9NYY3 685 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 ASH2LQ9UBL3 628 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 CNOT8Q9UFF9 292 aaKnown RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 MTF2Q9Y483 593 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-224ENST00000621573 ANAPC1Q9H1A4 1944 aa8.36□□□□□ -1.07
TARDBP-224ENST00000621573 A0A0C4DFX4 3053 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 C2CD4BA6NLJ0 364 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 HOXC11O43248 304 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 PI15O43692 258 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 RFPL3O75679 317 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 IGLV3-25P01717 112 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 DCNP07585 359 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 TYRP14679 529 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 RDXP35241 583 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 RFC1P35251 1148 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CLCN5P51795 746 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 ATXN1P54253 815 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 LINC00310P59036 64 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 KDSRQ06136 332 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 GFPT1Q06210 699 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 MAMLD1Q13495 774 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 SLC18A3Q16572 532 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 C15orf59Q2T9L4 293 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CCDC14Q49A88 953 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 MPPE1Q53F39 396 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 RAP1GAP2Q684P5 730 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 NAIF1Q69YI7 327 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 PLEKHA7Q6IQ23 1121 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 TRNP1Q6NT89 227 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 SCYL2Q6P3W7 929 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 ARCQ7LC44 396 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CHSY1Q86X52 802 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 RBM12BQ8IXT5 1001 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 LGI2Q8N0V4 545 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CPXM2Q8N436 756 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 TC2NQ8N9U0 490 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 AZIN2Q96A70 460 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 BTN2A3PQ96KV6 586 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 PNKPQ96T60 521 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 TKTL2Q9H0I9 626 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 SIK2Q9H0K1 926 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 ISCUQ9H1K1 167 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 LMAN1LQ9HAT1 526 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CATSPERZQ9NTU4 200 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 PIGVQ9NUD9 493 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 DNAJC17Q9NVM6 304 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 TMEM51Q9NW97 253 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 XPO7Q9UIA9 1087 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CNOT6Q9ULM6 557 aaKnown RBP8.35□□□□□ -1.07
TARDBP-224ENST00000621573 CBLCQ9ULV8 474 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 KCTD3Q9Y597 815 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 PAXBP1Q9Y5B6 917 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 SCINQ9Y6U3 715 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 REV3LO60673 3130 aa8.35□□□□□ -1.07
TARDBP-224ENST00000621573 MYO16Q9Y6X6 1858 aa8.34□□□□□ -1.07
TARDBP-224ENST00000621573 PATJQ8NI35 1801 aa8.34□□□□□ -1.07
TARDBP-224ENST00000621573 TCRBV5S1A1TA0A578 114 aa8.34□□□□□ -1.07
TARDBP-224ENST00000621573 CCDC66A2RUB6 948 aa8.34□□□□□ -1.07
TARDBP-224ENST00000621573 TYW5A2RUC4 315 aaKnown RBP8.34□□□□□ -1.07
TARDBP-224ENST00000621573 TBC1D3BA6NDS4 549 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms