RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 HTRA2O43464 458 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-245ENST00000621399 AP1G1O43747 822 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 RNGTTO60942 597 aaKnown RBP18.73■□□□□ 0.59
CIRBP-245ENST00000621399 EPN2O95208 641 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 ITPKAP23677 461 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 SUOXP51687 545 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 ARMC12Q5T9G4 340 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 ERAP2Q6P179 960 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 NEK5Q6P3R8 708 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 ZSWIM9Q86XI8 627 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 SLC35B2Q8TB61 432 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 C1orf54Q8WWF1 131 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 PIGKQ92643 395 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 IMP4Q96G21 291 aaKnown RBP18.73■□□□□ 0.59
CIRBP-245ENST00000621399 OSBPL9Q96SU4 736 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 ARRDC1-AS1Q9H2J1 176 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 DNPEPQ9ULA0 475 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 SNX12Q9UMY4 172 aa18.73■□□□□ 0.59
CIRBP-245ENST00000621399 SHROOM3Q8TF72 1996 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 ZFHX2Q9C0A1 2572 aaPredicted RBP18.72■□□□□ 0.59
CIRBP-245ENST00000621399 A0A1W2PQU0 124 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 TSPAN6O43657 245 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 LIASO43766 372 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PGLSO95336 258 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PRKCGP05129 697 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 IGHV4-34P06331 123 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 MMP2P08253 660 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 ITIH2P19823 946 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 CA4P22748 312 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 MAOBP27338 520 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 CCR5P51681 352 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PPP2CBP62714 309 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PPP2CAP67775 309 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 SKOR1P84550 965 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 IHHQ14623 411 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 HS1BP3Q53T59 392 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 ASCL5Q7RTU5 278 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 FAM71DQ8N9W8 422 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 MS4A14Q96JA4 679 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 FEM1CQ96JP0 617 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 RBM15Q96T37 977 aaKnown RBP eCLIP18.72■□□□□ 0.59
CIRBP-245ENST00000621399 HINFPQ9BQA5 517 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 MIR1-1HGQ9H1L0 117 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 USP29Q9HBJ7 922 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PCDH12Q9NPG4 1184 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 TPX2Q9ULW0 747 aaKnown RBP18.72■□□□□ 0.59
CIRBP-245ENST00000621399 ITM2BQ9Y287 266 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PCDHGA5Q9Y5G8 931 aa18.72■□□□□ 0.59
CIRBP-245ENST00000621399 PLXND1Q9Y4D7 1925 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 AREL1O15033 823 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 CPP00450 1065 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 NFKB1P19838 968 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 MAT2AP31153 395 aaKnown RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 CD68P34810 354 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 DPP6P42658 865 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 FAM193AP78312 1265 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 ELP6Q0PNE2 266 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 SNX1Q13596 522 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 SIX1Q15475 284 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 CCNG2Q16589 344 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 ITPRIPL1Q6GPH6 555 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 PRPF39Q86UA1 669 aaKnown RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 TRIM69Q86WT6 500 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 HORMAD1Q86X24 394 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 SYT12Q8IV01 421 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 RASGEF1CQ8N431 466 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 SPATA22Q8NHS9 363 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 COG1Q8WTW3 980 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 DNASE2BQ8WZ79 361 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 RUBCNQ92622 972 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 NAPGQ99747 312 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 TMEM121Q9BTD3 319 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 TDRD1Q9BXT4 1180 aaKnown RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 RSPH14Q9UHP6 348 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 EIF2B4Q9UI10 523 aaKnown RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 GGT7Q9UJ14 662 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 PHTF1Q9UMS5 762 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 ZNF148Q9UQR1 794 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 CHKBQ9Y259 395 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 ABCA7Q8IZY2 2146 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 ATXN2Q99700 1313 aaKnown RBP18.71■□□□□ 0.59
CIRBP-245ENST00000621399 WDR87Q6ZQQ6 2873 aa18.71■□□□□ 0.59
CIRBP-245ENST00000621399 GPR179Q6PRD1 2367 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 CTAGE9A4FU28 777 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 CFAP69A5D8W1 941 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 F5H423 210 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-245ENST00000621399 RIOK3O14730 519 aaKnown RBP18.7■□□□□ 0.58
CIRBP-245ENST00000621399 SPINT1O43278 529 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 FZD6O60353 706 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 PDHA1P08559 390 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 TCP1P17987 556 aaKnown RBP18.7■□□□□ 0.58
CIRBP-245ENST00000621399 CD27P26842 260 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 MPLP40238 635 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 RPS21P63220 83 aaKnown RBP18.7■□□□□ 0.58
CIRBP-245ENST00000621399 ANKRD20A2Q5SQ80 823 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 ANKRD20A1Q5TYW2 823 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 ANKRD20A3Q5VUR7 823 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 KIAA1161Q6NSJ0 714 aa18.7■□□□□ 0.58
CIRBP-245ENST00000621399 NDUFAF2Q8N183 169 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms