RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 LMNB2Q03252 620 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 ZBTB17Q13105 803 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 UGP2Q16851 508 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 LRRC73Q5JTD7 316 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 MEI1Q5TIA1 1274 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 CCDC181Q5TID7 509 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 KIAA1161Q6NSJ0 714 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 B4GALNT4Q76KP1 1039 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 PRPF39Q86UA1 669 aaKnown RBP18.45■□□□□ 0.54
LITAF-220ENST00000620789 ZSWIM9Q86XI8 627 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 TRIM58Q8NG06 486 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 TFB1MQ8WVM0 346 aaKnown RBP18.45■□□□□ 0.54
LITAF-220ENST00000620789 SEMA3CQ99985 751 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 CAPN10Q9HC96 672 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 TM9SF3Q9HD45 589 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 ITM2BQ9Y287 266 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 ATP8A1Q9Y2Q0 1164 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 TTLL3Q9Y4R7 772 aa18.45■□□□□ 0.54
LITAF-220ENST00000620789 PLXNA2O75051 1894 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 LNP1A1A4G5 178 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 UPK3BL1B0FP48 263 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 UPK3BL2E5RIL1 263 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 NEMP1O14524 444 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 HTRA2O43464 458 aaPredicted RBP18.44■□□□□ 0.54
LITAF-220ENST00000620789 TJP3O95049 919 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 CES1P23141 567 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 AFF3P51826 1226 aaKnown RBP18.44■□□□□ 0.54
LITAF-220ENST00000620789 IRX4P78413 519 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 DSC2Q02487 901 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 NOMO1Q15155 1222 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 ZNF284Q2VY69 593 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 AASDHQ4L235 1098 aaPredicted RBP18.44■□□□□ 0.54
LITAF-220ENST00000620789 TMEM259Q4ZIN3 620 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 SETMARQ53H47 684 aaPredicted RBP18.44■□□□□ 0.54
LITAF-220ENST00000620789 ZC3H18Q86VM9 953 aaKnown RBP18.44■□□□□ 0.54
LITAF-220ENST00000620789 ZSCAN30Q86W11 494 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 PAF1Q8N7H5 531 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 CNTD1Q8N815 330 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 SPOCK2Q92563 424 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 FEM1CQ96JP0 617 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 SEPT10Q9P0V9 454 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 GGT7Q9UJ14 662 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 ZFR2Q9UPR6 939 aaKnown RBP18.44■□□□□ 0.54
LITAF-220ENST00000620789 DMTF1Q9Y222 760 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 PCDHGC4Q9Y5F7 938 aa18.44■□□□□ 0.54
LITAF-220ENST00000620789 A0A1W2PQ67 120 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 HACD1B0YJ81 288 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 ZSCAN12O43309 604 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 POLR2LP62875 67 aaKnown RBP18.43■□□□□ 0.54
LITAF-220ENST00000620789 RPS21P63220 83 aaKnown RBP18.43■□□□□ 0.54
LITAF-220ENST00000620789 RACK1P63244 317 aaKnown RBP18.43■□□□□ 0.54
LITAF-220ENST00000620789 OTUD4Q01804 1114 aaKnown RBP18.43■□□□□ 0.54
LITAF-220ENST00000620789 ELP6Q0PNE2 266 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 TRAF2Q12933 501 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 XRCC4Q13426 336 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 RPS6KA1Q15418 735 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 SEL1L3Q68CR1 1132 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 NAPEPLDQ6IQ20 393 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 ARRDC2Q8TBH0 407 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 ACTL9Q8TC94 416 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 SERAC1Q96JX3 654 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 SLC6A18Q96N87 628 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 QKIQ96PU8 341 aaKnown RBP eCLIP18.43■□□□□ 0.547e-9■■■■■ 34.6
LITAF-220ENST00000620789 CEP41Q9BYV8 373 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 PCDH12Q9NPG4 1184 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 RXFP3Q9NSD7 469 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 DMXL1Q9Y485 3027 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 PI4KAP42356 2102 aa18.43■□□□□ 0.54
LITAF-220ENST00000620789 PCDH15Q96QU1 1955 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 GOLGA6L9A6NEM1 432 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 MTSS1O43312 755 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 ENGP17813 658 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 ITIH2P19823 946 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 PTPN3P26045 913 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 GRIA4P48058 902 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 NIPAL4Q0D2K0 466 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 SLC45A4Q5BKX6 768 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 ERAP2Q6P179 960 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 REXO1L1PQ8IX06 675 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.42■□□□□ 0.54
LITAF-220ENST00000620789 PDCD6IPQ8WUM4 868 aaKnown RBP18.42■□□□□ 0.54
LITAF-220ENST00000620789 KLK6Q92876 244 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 EDEM2Q9BV94 578 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 FSCN3Q9NQT6 498 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 PCDHB9Q9Y5E1 797 aa18.42■□□□□ 0.54
LITAF-220ENST00000620789 ARHGAP33O14559 1287 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 RIOK3O14730 519 aaKnown RBP18.41■□□□□ 0.54
LITAF-220ENST00000620789 SLC31A1O15431 190 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 GDF9O60383 454 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 PGLSO95336 258 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 CPP00450 1065 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 SYPP08247 313 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 PRLRP16471 622 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 MMP12P39900 470 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 CSNK1EP49674 416 aaKnown RBP18.41■□□□□ 0.54
LITAF-220ENST00000620789 ARHGAP8P85298 464 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 CCDC173Q0VFZ6 552 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 WASHC5Q12768 1159 aa18.41■□□□□ 0.54
LITAF-220ENST00000620789 KLF1Q13351 362 aaPredicted RBP18.41■□□□□ 0.54
LITAF-220ENST00000620789 IHHQ14623 411 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms