RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CBX4O00257 560 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PLK4O00444 970 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 KRIT1O00522 736 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TOR1BO14657 336 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 MCF2LO15068 1137 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF185O15231 689 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 INSIG1O15503 277 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 DAPK3O43293 454 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 MAFKO60675 156 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PRAMEF11O60813 436 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TMCC1O94876 653 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 HEXIM1O94992 359 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TRIM16O95361 564 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 FAM107AO95990 144 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PRNPP04156 253 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 EPHX1P07099 455 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CTSLP07711 333 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PECAM1P16284 738 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CSRP1P21291 193 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 BCKDHBP21953 392 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 NFKBIAP25963 317 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 GKP32189 559 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CHRNA3P32297 505 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 MPLP40238 635 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 ARL4AP40617 200 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 MDH1P40925 334 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 SERPINH1P50454 418 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 DNA2P51530 1060 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CCR5P51681 352 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 AFF3P51826 1226 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 NDST2P52849 883 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 YBEYP58557 167 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 RPS14P62263 151 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 GUCY2DQ02846 1103 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 RPL6Q02878 288 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CAV1Q03135 178 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 C2orf54Q08AI8 447 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 IFFO1Q0D2I5 559 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 GALNT2Q10471 571 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF211Q13398 564 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PDK2Q15119 407 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 DLG2Q15700 870 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PARP15Q460N3 678 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 SWT1Q5T5J6 900 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 ATXN7L2Q5T6C5 722 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 LYSMD4Q5XG99 296 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 IL31Q6EBC2 164 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 VSIG1Q86XK7 387 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CACUL1Q86Y37 369 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 DCP2Q8IU60 420 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PGBD5Q8N414 524 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 OXR1Q8N573 874 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 OTUD6BQ8N6M0 293 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 ANKS4BQ8N8V4 417 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 BBOF1Q8ND07 529 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TMIEQ8NEW7 156 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 OR2A12Q8NGT7 310 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 EXD1Q8NHP7 514 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 HMGB4Q8WW32 186 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 RLN3Q8WXF3 142 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 RAB7BQ96AH8 199 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 FAM131CQ96AQ9 280 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 HES6Q96HZ4 224 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PPP1R16AQ96I34 528 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 OLFM3Q96PB7 478 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PLCD4Q9BRC7 762 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 HEMGNQ9BXL5 484 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TPSD1Q9BZJ3 242 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 FOXP3Q9BZS1 431 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 BTBD1Q9H0C5 482 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TNKS2Q9H2K2 1166 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CATSPERBQ9H7T0 1116 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 C10orf88Q9H8K7 445 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 TMBIM4Q9HC24 238 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 WSB2Q9NYS7 404 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 DTLQ9NZJ0 730 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 RCOR3Q9P2K3 495 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 LHX3Q9UBR4 397 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 IPO11Q9UI26 975 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 MBD1Q9UIS9 605 aaPredicted RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 SLC25A13Q9UJS0 675 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 SLC6A14Q9UN76 642 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 DMTF1Q9Y222 760 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 FCF1Q9Y324 198 aaKnown RBP5.32□□□□□ -1.56
SHMT1-211ENST00000618902 PCDHGB2Q9Y5G2 931 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 WASF2Q9Y6W5 498 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 CHD6Q8TD26 2715 aa5.32□□□□□ -1.56
SHMT1-211ENST00000618902 THADAQ6YHU6 1953 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ASCC3Q8N3C0 2202 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 FRYQ5TBA9 3013 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 IGHV1OR15-9A0A0B4J2B8 117 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 A0A1B0GTW7 788 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 GMNCA6NCL1 334 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 METTL12A8MUP2 240 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 C10orf142B7Z368 130 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 DFFAO00273 331 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 NDUFAB1O14561 156 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 KCNK3O14649 394 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 SPINT1O43278 529 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 CEP104O60308 925 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms