RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 CSPG4P5Q96PW8 444 aa25.45■■□□□ 1.66
VEGFA-228ENST00000617771 SEPT3Q9UH03 358 aa25.45■■□□□ 1.66
VEGFA-228ENST00000617771 FAM149AA5PLN7 773 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 SRRM3A6NNA2 597 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-228ENST00000617771 TOR1BO14657 336 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 FFAR2O15552 330 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 BUB1BO60566 1050 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-228ENST00000617771 NME1P15531 152 aaKnown RBP25.44■■□□□ 1.66
VEGFA-228ENST00000617771 AMPD1P23109 780 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 ACP1P24666 158 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 RGRP47804 291 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 YPEL5P62699 121 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 SLC25A11Q02978 314 aaKnown RBP25.44■■□□□ 1.66
VEGFA-228ENST00000617771 PTK2BQ14289 1009 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 TMCO4Q5TGY1 634 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 CAMK1DQ8IU85 385 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 PCDH12Q9NPG4 1184 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 NLGN3Q9NZ94 848 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 USP24Q9UPU5 2620 aa25.44■■□□□ 1.66
VEGFA-228ENST00000617771 AKAP13Q12802 2813 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 WDFY3Q8IZQ1 3526 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 CAPNS1P04632 268 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 SERPINB6P35237 376 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 IGFALSP35858 605 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 SSR1P43307 286 aaKnown RBP25.43■■□□□ 1.66
VEGFA-228ENST00000617771 THOP1P52888 689 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 DAB2P98082 770 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 BCL2L1Q07817 233 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 KRT81Q14533 505 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 LBRQ14739 615 aaKnown RBP25.43■■□□□ 1.66
VEGFA-228ENST00000617771 HADHQ16836 314 aaKnown RBP25.43■■□□□ 1.66
VEGFA-228ENST00000617771 SPECC1LQ69YQ0 1117 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 PROSER1Q86XN7 944 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 MARCH9Q86YJ5 346 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 PAF1Q8N7H5 531 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 ZNF564Q8TBZ8 553 aaPredicted RBP25.43■■□□□ 1.66
VEGFA-228ENST00000617771 PSKH2Q96QS6 385 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 DUSP23Q9BVJ7 150 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 PCDH18Q9HCL0 1135 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 ATP8A1Q9Y2Q0 1164 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 PLXNB3Q9ULL4 1909 aa25.43■■□□□ 1.66
VEGFA-228ENST00000617771 RIOK3O14730 519 aaKnown RBP25.42■■□□□ 1.66
VEGFA-228ENST00000617771 SCAMP1O15126 338 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 JUPP14923 745 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 EIF4A3P38919 411 aaKnown RBP25.42■■□□□ 1.66
VEGFA-228ENST00000617771 AP1S1P61966 158 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 ZNF235Q14590 738 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 TXNRD3NBQ6F5E7 133 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 TP53INP2Q8IXH6 220 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 TP53I13Q8NBR0 393 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-228ENST00000617771 ZNF548Q8NEK5 533 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-228ENST00000617771 BTN2A2Q8WVV5 523 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 TSPY26PQ9H489 355 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 ETNK2Q9NVF9 386 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 EVA1BQ9NVM1 165 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 RCOR3Q9P2K3 495 aaPredicted RBP25.42■■□□□ 1.66
VEGFA-228ENST00000617771 NENFQ9UMX5 172 aa25.42■■□□□ 1.66
VEGFA-228ENST00000617771 TPM1P09493 284 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 JUNDP17535 347 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 MMP12P39900 470 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 SCNN1BP51168 640 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 CDH6P55285 790 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 POLR2LP62875 67 aaKnown RBP25.41■■□□□ 1.66
VEGFA-228ENST00000617771 LRRC14Q15048 493 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 TSR1Q2NL82 804 aaKnown RBP25.41■■□□□ 1.66
VEGFA-228ENST00000617771 BBS5Q8N3I7 341 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 ATPAF2Q8N5M1 289 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 PDCD7Q8N8D1 485 aaKnown RBP25.41■■□□□ 1.66
VEGFA-228ENST00000617771 OR8K1Q8NGG5 319 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 NSMCE1Q8WV22 266 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 CTNNBL1Q8WYA6 563 aaPredicted RBP25.41■■□□□ 1.66
VEGFA-228ENST00000617771 DEF6Q9H4E7 631 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 MBNL1Q9NR56 388 aaKnown RBP25.41■■□□□ 1.66
VEGFA-228ENST00000617771 ZNHIT6Q9NWK9 470 aaKnown RBP25.41■■□□□ 1.66
VEGFA-228ENST00000617771 CTTNBP2NLQ9P2B4 639 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 UVRAGQ9P2Y5 699 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 CSNK1G3Q9Y6M4 447 aa25.41■■□□□ 1.66
VEGFA-228ENST00000617771 H2AFZP0C0S5 128 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 GIMD1P0DJR0 217 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 C6P13671 934 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 HSPA9P38646 679 aaKnown RBP25.4■■□□□ 1.66
VEGFA-228ENST00000617771 E2F1Q01094 437 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 SLC10A7Q0GE19 358 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 CAMK2BQ13554 666 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 IRF4Q15306 451 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 SLC18A3Q16572 532 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 TPRG1LQ5T0D9 272 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 HES3Q5TGS1 186 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 H2AFVQ71UI9 128 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 ZSWIM9Q86XI8 627 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 MDM1Q8TC05 714 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 ECHDC3Q96DC8 303 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 USP29Q9HBJ7 922 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 LCMT1Q9UIC8 334 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 COQ6Q9Y2Z9 468 aa25.4■■□□□ 1.66
VEGFA-228ENST00000617771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.39■■□□□ 1.66
VEGFA-228ENST00000617771 TRABD2BA6NFA1 517 aa25.39■■□□□ 1.66
VEGFA-228ENST00000617771 MUSKO15146 869 aa25.39■■□□□ 1.66
VEGFA-228ENST00000617771 AQP9O43315 295 aa25.39■■□□□ 1.66
VEGFA-228ENST00000617771 LZTS3O60299 673 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms