RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 LRRC6Q86X45 466 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ARL6IP6Q8N6S5 226 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 B3GALNT2Q8NCR0 500 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 CCNYQ8ND76 341 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 RFWD2Q8NHY2 731 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 INTS12Q96CB8 462 aaKnown RBP5.62□□□□□ -1.51
CPNE4-214ENST00000617767 GCNAQ96QF7 691 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ALPK1Q96QP1 1244 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 CDK5RAP1Q96SZ6 601 aaKnown RBP5.62□□□□□ -1.51
CPNE4-214ENST00000617767 LGMNQ99538 433 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 PIP5K1AQ99755 562 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ADAM2Q99965 735 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ACAT2Q9BWD1 397 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 CLPBQ9H078 707 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ADNPQ9H2P0 1102 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 NARFLQ9H6Q4 476 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 IFT22Q9H7X7 185 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 RAB6BQ9NRW1 208 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 FAM105AQ9NUU6 356 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ATP6V1HQ9UI12 483 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 PADI3Q9ULW8 664 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 COL1A2P08123 1366 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 TMEM63AO94886 807 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 TTC4O95801 387 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 OLFM2O95897 454 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SNRPAP09012 282 aaKnown RBP5.62□□□□□ -1.51
CPNE4-214ENST00000617767 POU2F1P14859 743 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 KLRC2P26717 231 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 GRIA1P42261 906 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SULT1E1P49888 294 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 RAP1GDS1P52306 607 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ARHGDIBP52566 201 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ZNF143P52747 638 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-214ENST00000617767 MRPS6P82932 125 aaKnown RBP5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SLC6A3Q01959 620 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 TAP1Q03518 808 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 DPYSL3Q14195 570 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 TCEAL1Q15170 157 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 IDO2Q6ZQW0 420 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 KDELC2Q7Z4H8 507 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 KRT77Q7Z794 578 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 LRRTM3Q86VH5 581 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SIX6OS1Q8N1H7 587 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SLC7A14Q8TBB6 771 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 CD99L2Q8TCZ2 262 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 FRS2Q8WU20 508 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 IPCEF1Q8WWN9 437 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-214ENST00000617767 TBC1D20Q96BZ9 403 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SENP8Q96LD8 212 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ZSCAN5AQ9BUG6 496 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 TXLNGYQ9BZA5 131 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SIK2Q9H0K1 926 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 LHX5Q9H2C1 402 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 CYP3A43Q9HB55 503 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 SPC25Q9HBM1 224 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 LRRC4Q9HBW1 653 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 ANKRD12Q6UB98 2062 aa5.62□□□□□ -1.51
CPNE4-214ENST00000617767 MBLAC1A4D2B0 266 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 NT5C1B-RDH14C9J2C7 533 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 M0QYT0 321 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 NRP1O14786 923 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 AP1G1O43747 822 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SCO2O43819 266 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SOAT2O75908 522 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 FAM155BO75949 473 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 AMHP03971 560 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SRGAP2BP0DMP2 458 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 PEX2P28328 305 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 FOXN2P32314 431 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SOX11P35716 441 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 PGM1P36871 562 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 CRYBB1P53674 252 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 ATN1P54259 1190 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 NR1H2P55055 460 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 MPP2Q14168 576 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 GK3PQ14409 553 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SPARCL1Q14515 664 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 TLR1Q15399 786 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 PPM1LQ5SGD2 360 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 MFSD14CQ5VZR4 134 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 CASC4Q6P4E1 433 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 BORAQ6PGQ7 559 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 BNC2Q6ZN30 1099 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 ZNF704Q6ZNC4 412 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 MTDHQ86UE4 582 aaKnown RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 IGDCC3Q8IVU1 814 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 CTAGE3PQ8IX95 158 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 EIF1ADQ8N9N8 165 aaKnown RBP5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SCAMP5Q8TAC9 235 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SLC35F5Q8WV83 523 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 SPOCK2Q92563 424 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 RNF34Q969K3 372 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 FAF2Q96CS3 445 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 MCRS1Q96EZ8 462 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 OLFM1Q99784 485 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 CNPY3Q9BT09 278 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 HOXD1Q9GZZ0 328 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 ARL8BQ9NVJ2 186 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 ZDHHC7Q9NXF8 308 aa5.61□□□□□ -1.51
CPNE4-214ENST00000617767 WHRNQ9P202 907 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms