RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ITKQ08881 620 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 RALGDSQ12967 914 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 NRF1Q16656 503 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 FAM83EQ2M2I3 478 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 SLC5A9Q2M3M2 681 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
C11orf54-215ENST00000617482 AGKQ53H12 422 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 IL31Q6EBC2 164 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 LAYNQ6UX15 382 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 AGMOQ6ZNB7 445 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 LDB1Q86U70 411 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-215ENST00000617482 TICAM1Q8IUC6 712 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 CASP10Q92851 521 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 VCX3AQ9NNX9 186 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 RAB26Q9ULW5 256 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 ATP6AP2A0A1C7CYW4 349 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 TTC24A2A3L6 582 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 A8MT66 165 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 IRAK2O43187 625 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 TRPA1O75762 1119 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 ATP6AP2O75787 350 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CSPG5O95196 566 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 SPATA31D3P0C874 917 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 DNAJB1P25685 340 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CCR1P32246 355 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 WNT3AP56704 352 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 DNAJB13P59910 316 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 MAXP61244 160 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 MYBPC1Q00872 1141 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 RFTN1Q14699 578 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 FAM110CQ1W6H9 321 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 SPATA31D4Q6ZUB0 917 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 C14orf80Q86SX3 495 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 OR10T2Q8NGX3 314 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 HMGCLL1Q8TB92 370 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 HAPLN3Q96S86 360 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 PRPF18Q99633 342 aaKnown RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CATSPERBQ9H7T0 1116 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 MTF2Q9Y483 593 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 SMIM31A0A1B0GVY4 71 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 M0QZ92 97 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 PSMD12O00232 456 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 TRIM38O00635 465 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 UBDO15205 165 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 GPC4O75487 556 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 IGLV3-25P01717 112 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 ODC1P11926 461 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 RPL5P46777 297 aaKnown RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 DYNC1I2Q13409 638 aaKnown RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 LSAMPQ13449 338 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 BIRC2Q13490 618 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 FASTKQ14296 549 aaKnown RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 TECRLQ5HYJ1 363 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 AGAP9Q5VTM2 703 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CLEC6AQ6EIG7 209 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 FAM171BQ6P995 826 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CYP2R1Q6VVX0 501 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 RBM44Q6ZP01 1051 aaKnown RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CUZD1Q86UP6 607 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 METTL25Q8N6Q8 603 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 TMEM102Q8N9M5 508 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 CATSPER1Q8NEC5 780 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 ANKRD49Q8WVL7 239 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 DLG3Q92796 817 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 EME1Q96AY2 570 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 PRICKLE1Q96MT3 831 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-215ENST00000617482 GRIP2Q9C0E4 1043 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 EPS15L1Q9UBC2 864 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 SLC4A7Q9Y6M7 1214 aa11.88□□□□□ -0.51
C11orf54-215ENST00000617482 F8W810 466 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 FBP2O00757 339 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 FGFR3P22607 806 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 YWHAQP27348 245 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 MRPS6P82932 125 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 EIF4EBP2Q13542 120 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 TRIM25Q14258 630 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 REP15Q6BDI9 236 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 KIAA0930Q6ICG6 404 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 TFAP2DQ7Z6R9 452 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 METTL23Q86XA0 190 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 TMEM126BQ8IUX1 230 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 OR9I1Q8NGQ6 314 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 OR6P1Q8NGX9 317 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 ASB9Q96DX5 294 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 ACBD6Q9BR61 282 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 NT5MQ9NPB1 228 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 CACNA2D2Q9NY47 1150 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 IPO11Q9UI26 975 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 AP4S1Q9Y587 144 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms