RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 HS3ST3A1Q9Y663 406 aa17.89■□□□□ 0.45
TRAPPC3-209ENST00000616395 USP9YO00507 2555 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 NTN3O00634 580 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 RAD51BO15315 384 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 LSM8O95777 96 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 CKAP4Q07065 602 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 EIF3IQ13347 325 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 NNTQ13423 1086 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 TAF3Q5VWG9 929 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 HIST2H2BCQ6DN03 193 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 ACAD10Q6JQN1 1059 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 CXorf57Q6NSI4 855 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 NOP9Q86U38 636 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 ZSCAN1Q8NBB4 408 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 ALG14Q96F25 216 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 WDR24Q96S15 920 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 SYT11Q9BT88 431 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 FOXP3Q9BZS1 431 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 MIS12Q9H081 205 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 ISCUQ9H1K1 167 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 SEPT10Q9P0V9 454 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 IPO11Q9UI26 975 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 LCMT1Q9UIC8 334 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 NAALADL1Q9UQQ1 740 aa17.88■□□□□ 0.45
TRAPPC3-209ENST00000616395 BLACEA4D250 179 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 TMCO5BA8MYB1 307 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 RNF103O00237 685 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 FTLP02792 175 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 TCP1P17987 556 aaKnown RBP17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 FGL2Q14314 439 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 STILQ15468 1287 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 WHAMMP3Q1A5X7 153 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 TPRG1LQ5T0D9 272 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 TAC4Q86UU9 113 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 ZNF606Q8WXB4 792 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 GLMNQ92990 594 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 L2HGDHQ9H9P8 463 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 ST7Q9NRC1 585 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 TRIM10Q9UDY6 481 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 PISDQ9UG56 409 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 CDC23Q9UJX2 597 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 PADI4Q9UM07 663 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 SAR1BQ9Y6B6 198 aa17.87■□□□□ 0.45
TRAPPC3-209ENST00000616395 RCCD1A6NED2 376 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 F5H5T6 163 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 NVLO15381 856 aaKnown RBP17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 SPINT1O43278 529 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 GCATO75600 419 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 PAK4O96013 591 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 APOEP02649 317 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 MMEP08473 750 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 CHRNA3P32297 505 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 GPD2P43304 727 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 SNX16P57768 344 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 CCDC15Q0P6D6 951 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 EIF2B5Q13144 721 aaKnown RBP17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 C1orf61Q13536 156 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 PDE1CQ14123 709 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 CLEC16AQ2KHT3 1053 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 ZC3H12AQ5D1E8 599 aaKnown RBP17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 RBFAQ8N0V3 343 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 FAM26EQ8N5C1 309 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 SH2D3CQ8N5H7 860 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 TMEM35BQ8NCS4 154 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 OR52K2Q8NGK3 314 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 SLC20A1Q8WUM9 679 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 SLC17A9Q9BYT1 436 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 STRADBQ9C0K7 418 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 TCEAL2Q9H3H9 227 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 DYRK4Q9NR20 520 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 CTTNBP2NLQ9P2B4 639 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 UVRAGQ9P2Y5 699 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 NENFQ9UMX5 172 aa17.86■□□□□ 0.45
TRAPPC3-209ENST00000616395 BUB1O43683 1085 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 JMJD7P0C870 316 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 RABIFP47224 123 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 FMO1Q01740 532 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 ERN2Q76MJ5 926 aaKnown RBP17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 ZFAND4Q86XD8 727 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 OR2A12Q8NGT7 310 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 RNF34Q969K3 372 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 BTN2A3PQ96KV6 586 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 FEM1AQ9BSK4 669 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 ADNPQ9H2P0 1102 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 MRPL47Q9HD33 250 aaKnown RBP17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 KCNK4Q9NYG8 393 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 SPASTQ9UBP0 616 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 RNF14Q9UBS8 474 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 HYOU1Q9Y4L1 999 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 RP1P56715 2156 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 NOTCH2Q04721 2471 aa17.85■□□□□ 0.45
TRAPPC3-209ENST00000616395 SPTAN1Q13813 2472 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 NBPF19A0A087WUL8 3843 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 TCAF2A6NFQ2 919 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 E5RJQ4 531 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 CALB1P05937 261 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 CASRP41180 1078 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 HADHBP55084 474 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms