RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TBATAQ96M53 351 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 NSMCE3Q96MG7 304 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 NPAS2Q99743 824 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC25A51Q9H1U9 297 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 ZNF212Q9UDV6 495 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 PDE4DIPQ5VU43 2346 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 LRRC14BA6NHZ5 514 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 CAPN15O75808 1086 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 OAZ2O95190 189 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 ENO3P13929 434 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 RPL17P18621 184 aaKnown RBP14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 PEX2P28328 305 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC12A2P55011 1212 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 AP2B1P63010 937 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 DUSP4Q13115 394 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 MSLNQ13421 630 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 GPR158Q5T848 1215 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC24A5Q71RS6 500 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 KDM1BQ8NB78 822 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 OR13C4Q8NGS5 318 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 ACTRT2Q8TDY3 377 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC45A3Q96JT2 553 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 UROC1Q96N76 676 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 FAM193BQ96PV7 902 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 ZNF184Q99676 751 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 MARCH2Q9P0N8 246 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
PCDHGA3-202ENST00000612467 GREB1Q4ZG55 1949 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ATP6AP2A0A1C7CYW4 349 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 EME2A4GXA9 379 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 PPP6CO00743 305 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 PSMD3O43242 534 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ATP6AP2O75787 350 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ZCCHC18P0CG32 403 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ASPHQ12797 758 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 CDC16Q13042 620 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 SEMA3AQ14563 771 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 TCTN1Q2MV58 587 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 CLEC6AQ6EIG7 209 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 KIAA0930Q6ICG6 404 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 TIGD7Q6NT04 549 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 PRSS55Q6UWB4 352 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 GK5Q6ZS86 529 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 PPFIBP2Q8ND30 876 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 SEMA3CQ99985 751 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 GPAMQ9HCL2 828 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ANGPTL2Q9UKU9 493 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 FNDC3AQ9Y2H6 1198 aaKnown RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ADAM12O43184 909 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 CCNT2O60583 730 aaKnown RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 GCKP35557 465 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ZNF33AQ06730 810 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 KLC1Q07866 573 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 SFT2D3Q587I9 215 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 CAPRIN2Q6IMN6 1127 aaKnown RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 LMNTD2Q8IXW0 634 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ARRDC2Q8TBH0 407 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 SREK1Q8WXA9 508 aaKnown RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 CDRT15Q96T59 188 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 YIPF3Q9GZM5 350 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 MRPL46Q9H2W6 279 aaKnown RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 EBF3Q9H4W6 596 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ALG9Q9H6U8 611 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 GIMAP2Q9UG22 337 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 ARHGAP26Q9UNA1 814 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 PCDHB5Q9Y5E4 795 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 PTGDR2Q9Y5Y4 395 aa14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 COPG1Q9Y678 874 aaKnown RBP14.18□□□□□ -0.14
PCDHGA3-202ENST00000612467 RAG1P15918 1043 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 YWHAQP27348 245 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 OR1E1P30953 314 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 THOP1P52888 689 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 CDH13P55290 713 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 C1QTNF8P60827 252 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 PRKAA1Q13131 559 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 UGP2Q16851 508 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 FSCBQ5H9T9 825 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 HECTD2Q5U5R9 776 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 BEND5Q7L4P6 421 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 DCP1BQ8IZD4 617 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 DSELQ8IZU8 1212 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 UMODL1-AS1Q8N2C9 162 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 NAT14Q8WUY8 206 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 DNAJC1Q96KC8 554 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC24A3Q9HC58 644 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 AK5Q9Y6K8 562 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 A6NHS1 94 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 A8MT66 165 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 ATXN1LP0C7T5 689 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 RHOQP17081 205 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 XRCC1P18887 633 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 PEX19P40855 299 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 RENBPP51606 427 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 SULT2A1Q06520 285 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 HNRNPDQ14103 355 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 POLD3Q15054 466 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms