RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	PKN3	Q6P5Z2	889 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	DCLRE1A	Q6PJP8	1040 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	ABRAXAS1	Q6UWZ7	409 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SPRED1	Q7Z699	444 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	CUZD1	Q86UP6	607 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	MFSD6L	Q8IWD5	586 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SHCBP1	Q8NEM2	672 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	BEST2	Q8NFU1	509 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	FEM1C	Q96JP0	617 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	TEKT5	Q96M29	485 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	TUBA1C	Q9BQE3	449 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	GPATCH1	Q9BRR8	931 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	TUBGCP4	Q9UGJ1	667 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	GNPTG	Q9UJJ9	305 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	COQ6	Q9Y2Z9	468 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	WDR90	Q96KV7	1748 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SNAP91	O60641	907 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	NOL3	O60936	208 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SERPINB7	O75635	380 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	RASAL1	O95294	804 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	MYL3	P08590	195 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	OCM2	P0CE71	109 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	OCM	P0CE72	109 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	FCGR1A	P12314	374 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	IL10	P22301	178 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	FAS	P25445	335 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	PSMA4	P25789	261 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	RPL10	P27635	214 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	ADRA1B	P35368	520 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	STX1B	P61266	288 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	RAB39A	Q14964	217 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	MOG	Q16653	247 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	PPP1R3A	Q16821	1122 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SPATS1	Q496A3	300 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	TECRL	Q5HYJ1	363 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	AARS2	Q5JTZ9	985 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	FASTKD5	Q7L8L6	764 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	ANKRD13A	Q8IZ07	590 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	NPW	Q8N729	165 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	PNPT1	Q8TCS8	783 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SLC2A14	Q8TDB8	520 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	DQX1	Q8TE96	717 aa	Known RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	HEXDC	Q8WVB3	486 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	ITPKC	Q96DU7	683 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SNX27	Q96L92	541 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	HOPX	Q9BPY8	73 aa	Predicted RBP	13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	PIGV	Q9NUD9	493 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	ERAP1	Q9NZ08	941 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	COX16	Q9P0S2	106 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	AKT3	Q9Y243	479 aa		13.84	□□□□□ -0.19
UBE2F-223	ENST00000612130	SCN1A	P35498	2009 aa		13.83	□□□□□ -0.19
UBE2F-223	ENST00000612130	FUOM	A2VDF0	154 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	SOBP	A7XYQ1	873 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	HCRT	O43612	131 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	IPO13	O94829	963 aa	Known RBP	13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	HSD17B1	P14061	328 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	RPS12	P25398	132 aa	Known RBP	13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	MAGEA10	P43363	369 aa	Predicted RBP	13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	CD151	P48509	253 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	POU4F1	Q01851	419 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	PMS2P3	Q13401	168 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	TMTC4	Q5T4D3	741 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	ANKRD23	Q86SG2	305 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	PIGZ	Q86VD9	579 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	CHPT1	Q8WUD6	406 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	PTCD2	Q8WV60	388 aa	Known RBP	13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	CENPN	Q96H22	339 aa	Predicted RBP	13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	ELMO2	Q96JJ3	720 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	TRMO	Q9BU70	441 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	PFDN4	Q9NQP4	134 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	IGSF5	Q9NSI5	407 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	ITGB1BP2	Q9UKP3	347 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	FIS1	Q9Y3D6	152 aa		13.83	□□□□□ -0.2
UBE2F-223	ENST00000612130	TSC2	P49815	1807 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130		A0A1W2PPW3	197 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	IQCA1L	A6NCM1	817 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130		A8MT66	165 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	FAM72C	H0Y354	149 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	SOCS7	O14512	581 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	ESRRB	O95718	433 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	TFPT	P0C1Z6	253 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	UGT1A6	P19224	532 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	UGT1A1	P22309	533 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	UGT1A4	P22310	534 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	UGT1A3	P35503	534 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	UGT1A5	P35504	534 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	CCT8	P50990	548 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	BCAP31	P51572	246 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	ZNF135	P52742	658 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	SLC12A2	P55011	1212 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	TAS2R39	P59534	338 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	IGBP1	P78318	339 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	GSTM4	Q03013	218 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	KCNC4	Q03721	635 aa		13.82	□□□□□ -0.2
UBE2F-223	ENST00000612130	NME3	Q13232	169 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms