RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TSTD2Q5T7W7 516 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 NLRP9Q7RTR0 991 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
CBWD1-220ENST00000612045 ADIPOR2Q86V24 386 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
CBWD1-220ENST00000612045 BLOC1S5Q8TDH9 187 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 ATP2A3Q93084 1043 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 SERAC1Q96JX3 654 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 CPNE1Q99829 537 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 SSU72Q9NP77 194 aaKnown RBP12.4□□□□□ -0.42
CBWD1-220ENST00000612045 IARS2Q9NSE4 1012 aaKnown RBP12.4□□□□□ -0.42
CBWD1-220ENST00000612045 OBP2AQ9NY56 170 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 CLEC1BQ9P126 229 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 FBXO10Q9UK96 956 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 CDH7Q9ULB5 785 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
CBWD1-220ENST00000612045 FAM47DPA6NHR8 397 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 TRIM24O15164 1050 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 PRPF4O43172 522 aaKnown RBP eCLIP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 HOXC11O43248 304 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 LDB2O43679 373 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 VAPBO95292 243 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 PRKCGP05129 697 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 PDHA1P08559 390 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 FCARP24071 287 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 GP5P40197 560 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 CSNK1DP48730 415 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ECT2LQ008S8 904 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 DGKKQ5KSL6 1271 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ATAT1Q5SQI0 421 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 GRTP1Q5TC63 336 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 MROH9Q5TGP6 573 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 KIAA0930Q6ICG6 404 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 TANGO2Q6ICL3 276 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 SH2D5Q6ZV89 423 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 CENPTQ96BT3 561 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 RMDN1Q96DB5 314 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ZFYVE19Q96K21 471 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 S1PR5Q9H228 398 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 INTS9Q9NV88 658 aaKnown RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 LMCD1Q9NZU5 365 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 SLC25A13Q9UJS0 675 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 SMG5Q9UPR3 1016 aaKnown RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ANKRD36A6QL64 1941 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ANKRD66B4E2M5 251 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 GOLGA8RI6L899 631 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 TYROBPO43914 113 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 NFATC1O95644 943 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 IGSF6O95976 241 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 PIRTP0C851 137 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ARSAP15289 507 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 CA4P22748 312 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 LSP1P33241 339 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 MAPK8P45983 427 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 SLC18A1P54219 525 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 DLX2Q07687 328 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 LAMB3Q13751 1172 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 TMEM215Q68D42 235 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 CES5AQ6NT32 575 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 CNTN4Q8IWV2 1026 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 AHI1Q8N157 1196 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ANKRD42Q8N9B4 389 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 LPCAT1Q8NF37 534 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 OR13J1Q8NGT2 312 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 OR6K2Q8NGY2 324 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 MGARPQ8TDB4 240 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 PDCD6IPQ8WUM4 868 aaKnown RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ISG20Q96AZ6 181 aaKnown RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 ALKBH8Q96BT7 664 aaKnown RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 TNKS2Q9H2K2 1166 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 NKIRAS1Q9NYS0 192 aa12.39□□□□□ -0.43
CBWD1-220ENST00000612045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-220ENST00000612045 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.38□□□□□ -0.43
CBWD1-220ENST00000612045 FZD6O60353 706 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 TBX10O75333 385 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 RFPL1O75677 317 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 ITGA2BP08514 1039 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 CISD3P0C7P0 127 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 PYGBP11216 843 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 POLR2EP19388 210 aaKnown RBP12.38□□□□□ -0.43
CBWD1-220ENST00000612045 SLC18A2Q05940 514 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 GEN1Q17RS7 908 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 MBLAC2Q68D91 279 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 TIFABQ6ZNK6 161 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 CAMK1DQ8IU85 385 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 OR2AP1Q8NGE2 309 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 RBBP8Q99708 897 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms