RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MCF2LO15068 1137 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PRAMEF11O60813 436 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 CD160O95971 181 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 DNTTP04053 509 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 OXTRP30559 389 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 RECQLP46063 649 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 RPS14P62263 151 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 SNRPD1P62314 119 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PAFAH1B3Q15102 231 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 TTC31Q49AM3 519 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 FAM46CQ5VWP2 391 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 C22orf39Q6P5X5 142 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 Q6ZVU0 165 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 LRRC49Q8IUZ0 686 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 STK40Q8N2I9 435 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 NPWQ8N729 165 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 TTC13Q8NBP0 860 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PCDH19Q8TAB3 1148 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZC3H10Q96K80 434 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 RNF157Q96PX1 679 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 FAM129BQ96TA1 746 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 MAK16Q9BXY0 300 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 SP110Q9HB58 689 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PCDH9Q9HC56 1237 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 NINJ2Q9NZG7 142 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 USP36Q9P275 1121 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 UBA2Q9UBT2 640 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 RAB23Q9ULC3 237 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF148Q9UQR1 794 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 MYO15AQ9UKN7 3530 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZFHX2Q9C0A1 2572 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 GMNCA6NCL1 334 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 C1QTNF3-AMACRE9PGA6 284 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 NDUFAB1O14561 156 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF821O75541 412 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 FAM107AO95990 144 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ADH1BP00325 375 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 IGLV3-19P01714 112 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 LMNAP02545 664 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ABHD2P08910 425 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 VAV1P15498 845 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZFXP17010 805 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 MX2P20592 715 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 CCT5P48643 541 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 VPS41P49754 854 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 TPMTP51580 245 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 IFI35P80217 286 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 IL10RBQ08334 325 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 SRSF5Q13243 272 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 RFTN1Q14699 578 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 MORF4L2Q15014 288 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 CST6Q15828 149 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 KYNUQ16719 465 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 P3H1Q32P28 736 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PLK5Q496M5 336 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 NCBP2-AS2Q69YL0 99 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 SLC36A4Q6YBV0 504 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PRR23BQ6ZRT6 265 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 USP30Q70CQ3 517 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 SRLQ86TD4 932 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PRUNE1Q86TP1 453 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 KBTBD6Q86V97 674 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 MMAAQ8IVH4 418 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 GLIS1Q8NBF1 620 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 OR2A12Q8NGT7 310 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 EPS8L3Q8TE67 593 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF473Q8WTR7 871 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 RLN3Q8WXF3 142 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 ZNF599Q96NL3 588 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 CCT8L2Q96SF2 557 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 SLC6A17Q9H1V8 727 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 PDFQ9HBH1 243 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 IPO11Q9UI26 975 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 TPX2Q9ULW0 747 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 CYP8B1Q9UNU6 501 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 NCKAP1Q9Y2A7 1128 aa8.94□□□□□ -0.98
SMAD4-217ENST00000611848 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
SMAD4-217ENST00000611848 IGHV1OR15-9A0A0B4J2B8 117 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 TLDC2A0PJX2 215 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 J3KR12 359 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 EBAG9O00559 213 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 MID1O15344 667 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 BNIP3LO60238 219 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 CST8O60676 142 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 RHOBTB1O94844 696 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 TMCC1O94876 653 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 ACSL3O95573 720 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 GSRP00390 522 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 IL1BP01584 269 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 PRNPP04156 253 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 ZSCAN5DPP0CG00 497 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 C5AR1P21730 350 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 CD6P30203 668 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SLC8A1P32418 973 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 SEC24CP53992 1094 aa8.93□□□□□ -0.98
SMAD4-217ENST00000611848 OTUD4Q01804 1114 aaKnown RBP8.93□□□□□ -0.98
SMAD4-217ENST00000611848 TFDP2Q14188 446 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms