RNA–Protein interactions for RNA: ENST00000611786.4

ATRAID-208, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-208ENST00000611786 ZNF211Q13398 564 aaPredicted RBP20.48■□□□□ 0.87
ATRAID-208ENST00000611786 XRCC4Q13426 336 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 UGP2Q16851 508 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 CFAP58Q5T655 872 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 KIAA1161Q6NSJ0 714 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 PRPF39Q86UA1 669 aaKnown RBP20.48■□□□□ 0.87
ATRAID-208ENST00000611786 ZSWIM9Q86XI8 627 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 KIAA2013Q8IYS2 634 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 ZCCHC9Q8N567 271 aaKnown RBP20.48■□□□□ 0.87
ATRAID-208ENST00000611786 CNTD1Q8N815 330 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 HAUS1Q96CS2 278 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 FEM1CQ96JP0 617 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 SEMA3CQ99985 751 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 CAPN10Q9HC96 672 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 SLC6A14Q9UN76 642 aa20.48■□□□□ 0.87
ATRAID-208ENST00000611786 DOCK9Q9BZ29 2069 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 A0A1W2PQU0 124 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 UPK3BL1B0FP48 263 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 UPK3BL2E5RIL1 263 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 MTSS1O43312 755 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 RPS21P63220 83 aaKnown RBP20.47■□□□□ 0.87
ATRAID-208ENST00000611786 IRX4P78413 519 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 NOMO1Q15155 1222 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 RPS6KA1Q15418 735 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 ZNF284Q2VY69 593 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 TMEM259Q4ZIN3 620 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 CCDC181Q5TID7 509 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 TCEAL6Q6IPX3 200 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 ZC3H18Q86VM9 953 aaKnown RBP20.47■□□□□ 0.87
ATRAID-208ENST00000611786 REXO1L1PQ8IX06 675 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 C12orf50Q8NA57 414 aaPredicted RBP20.47■□□□□ 0.87
ATRAID-208ENST00000611786 ARRDC2Q8TBH0 407 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 TCEAL3Q969E4 200 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 NUSAP1Q9BXS6 441 aaKnown RBP20.47■□□□□ 0.87
ATRAID-208ENST00000611786 TM9SF3Q9HD45 589 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 ZFR2Q9UPR6 939 aaKnown RBP20.47■□□□□ 0.87
ATRAID-208ENST00000611786 DMTF1Q9Y222 760 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 PCDHGC4Q9Y5F7 938 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 SLCO1B1Q9Y6L6 691 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 DMXL1Q9Y485 3027 aa20.47■□□□□ 0.87
ATRAID-208ENST00000611786 TRPM6Q9BX84 2022 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 CFIP05156 583 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 XPAP23025 273 aaPredicted RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 MAT2AP31153 395 aaKnown RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 AFF3P51826 1226 aaKnown RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 RACK1P63244 317 aaKnown RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 LMNB2Q03252 620 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 ELP6Q0PNE2 266 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 CCDC173Q0VFZ6 552 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 KLF1Q13351 362 aaPredicted RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 SETMARQ53H47 684 aaPredicted RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 TEX44Q53QW1 395 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 B4GALNT4Q76KP1 1039 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 ACTL9Q8TC94 416 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 QKIQ96PU8 341 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 GGT7Q9UJ14 662 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 TTLL3Q9Y4R7 772 aa20.46■□□□□ 0.87
ATRAID-208ENST00000611786 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.46■□□□□ 0.87
ATRAID-208ENST00000611786 PCDH15Q96QU1 1955 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 LNP1A1A4G5 178 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 NEMP1O14524 444 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.86
ATRAID-208ENST00000611786 PTPN3P26045 913 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 OTUD4Q01804 1114 aaKnown RBP20.45■□□□□ 0.86
ATRAID-208ENST00000611786 DSC2Q02487 901 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 NIPAL4Q0D2K0 466 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 TRAF2Q12933 501 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 TMEM52BQ4KMG9 183 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 SLC45A4Q5BKX6 768 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 LRRC73Q5JTD7 316 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 SEL1L3Q68CR1 1132 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 ERAP2Q6P179 960 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 SERAC1Q96JX3 654 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 PCDH12Q9NPG4 1184 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 SEPT10Q9P0V9 454 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 ITM2BQ9Y287 266 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 CACNA1EQ15878 2313 aa20.45■□□□□ 0.86
ATRAID-208ENST00000611786 GOLGA6L9A6NEM1 432 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 PRAMEF26H0Y7S4 382 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 PGLSO95336 258 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 ITIH2P19823 946 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 GRIA4P48058 902 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 ARHGAP8P85298 464 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 WASHC5Q12768 1159 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 IHHQ14623 411 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 AASDHQ4L235 1098 aaPredicted RBP20.44■□□□□ 0.86
ATRAID-208ENST00000611786 NAPEPLDQ6IQ20 393 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 TTC13Q8NBP0 860 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 HTR3CQ8WXA8 447 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 ASB12Q8WXK4 309 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 TEKT5Q96M29 485 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 SLC6A18Q96N87 628 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 AGAP3Q96P47 875 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 VAT1Q99536 393 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 C1QTNF2Q9BXJ5 285 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 TLR10Q9BXR5 811 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 SLC17A9Q9BYT1 436 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 CEP41Q9BYV8 373 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 CARD9Q9H257 536 aa20.44■□□□□ 0.86
ATRAID-208ENST00000611786 PCDHB9Q9Y5E1 797 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms