RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SMOQ99835 787 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 TBL1YQ9BQ87 522 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 BCAP29Q9UHQ4 241 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 FBXO5Q9UKT4 447 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 SSC5DA1L4H1 1573 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 BOLA2-SMG1P6H3BVE0 249 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 CTSHP09668 335 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 ARNTP27540 789 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 MAGEA12P43365 314 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 NAB1Q13506 487 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 SH3D19Q5HYK7 790 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 TBCELQ5QJ74 424 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 KCTD11Q693B1 232 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 TAPT1Q6NXT6 567 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 TTC33Q6PID6 262 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-216ENST00000610401 CHSY3Q70JA7 882 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 ATPAF2Q8N5M1 289 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 NUDT8Q8WV74 236 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 HBEGFQ99075 208 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 USP22Q9UPT9 525 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 MYRFQ9Y2G1 1151 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 CCDC28BQ9BUN5 200 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 CPB1P15086 417 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 ATP6V1B2P21281 511 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 PGFP49763 221 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 CCR3P51677 355 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 ARL13BQ3SXY8 428 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 OTUD3Q5T2D3 398 aaPredicted RBP20.55■□□□□ 0.88
SSBP3-216ENST00000610401 SDHAF4Q5VUM1 108 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 GPR107Q5VW38 600 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 KLHL35Q6PF15 583 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 XKR5Q6UX68 686 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 DHFR2Q86XF0 187 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 B3GALT6Q96L58 329 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 NSUN5Q96P11 429 aaKnown RBP20.55■□□□□ 0.88
SSBP3-216ENST00000610401 NAA50Q9GZZ1 169 aaKnown RBP20.55■□□□□ 0.88
SSBP3-216ENST00000610401 RRN3Q9NYV6 651 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 NDUFA13Q9P0J0 144 aa20.55■□□□□ 0.88
SSBP3-216ENST00000610401 MKI67P46013 3256 aaKnown RBP20.55■□□□□ 0.88
SSBP3-216ENST00000610401 A8MT66 165 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 H3BMM5 538 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 B4GAT1O43505 415 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 RPS6KA2Q15349 733 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 PKN3Q6P5Z2 889 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 LRRC52Q8N7C0 313 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 VPS33AQ96AX1 596 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 SPAG4Q9NPE6 437 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 H6PDO95479 791 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 CD151P48509 253 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 DCTN2Q13561 401 aaKnown RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 ZBTB6Q15916 424 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 BTBD8Q5XKL5 378 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 NEPROQ6NW34 567 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 TAC4Q86UU9 113 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 TICAM1Q8IUC6 712 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 CATSPER1Q8NEC5 780 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 ASB9Q96DX5 294 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 OLAHQ9NV23 265 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 FBXW11Q9UKB1 542 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 CROTQ9UKG9 612 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 TMCO1Q9UM00 188 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 UBFD1O14562 309 aaKnown RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 TREHO43280 583 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 HTRA2O43464 458 aaPredicted RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 SNRPB2P08579 225 aaKnown RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 LINC00032P0C843 101 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 SMPD1P17405 629 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 EEF1B2P24534 225 aaKnown RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 CSE1LP55060 971 aaKnown RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 FOXA1P55317 472 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 LPIN1Q14693 890 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 PPHLN1Q8NEY8 458 aaKnown RBP20.54■□□□□ 0.88
SSBP3-216ENST00000610401 GPR78Q96P69 363 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 NFKBIZQ9BYH8 718 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 ZNF696Q9H7X3 374 aa20.54■□□□□ 0.88
SSBP3-216ENST00000610401 PIRO00625 290 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 GIPC1O14908 333 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 INPP4BO15327 924 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 SRP72O76094 671 aaKnown RBP20.53■□□□□ 0.88
SSBP3-216ENST00000610401 PRSS56P0CW18 603 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 OXTRP30559 389 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 NPY2RP49146 381 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 DAOAP59103 153 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 PRKCQQ04759 706 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 PPP1R8Q12972 351 aaKnown RBP20.53■□□□□ 0.88
SSBP3-216ENST00000610401 DCPSQ96C86 337 aaKnown RBP20.53■□□□□ 0.88
SSBP3-216ENST00000610401 GAD1Q99259 594 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.53■□□□□ 0.88
SSBP3-216ENST00000610401 THEGQ9P2T0 379 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 MID2Q9UJV3 735 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 TIMM22Q9Y584 194 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 BAIAP3O94812 1187 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 BEX3Q00994 111 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 DCAF4L1Q3SXM0 396 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 RETREG3Q86VR2 466 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 SENP8Q96LD8 212 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 CLEC11AQ9Y240 323 aa20.53■□□□□ 0.88
SSBP3-216ENST00000610401 SLC25A27O95847 323 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 PCNAP12004 261 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms