RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 NPR3P17342 541 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 WARSP23381 471 aaKnown RBP22.53■■□□□ 1.2
SHANK2-220ENST00000608988 ARCN1P48444 511 aaKnown RBP22.53■■□□□ 1.2
SHANK2-220ENST00000608988 ENTPD1P49961 510 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 STX1BP61266 288 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 ZNF829Q3KNS6 432 aaPredicted RBP22.53■■□□□ 1.2
SHANK2-220ENST00000608988 AGAP9Q5VTM2 703 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 CUZD1Q86UP6 607 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 FBXO16Q8IX29 292 aaPredicted RBP22.53■■□□□ 1.2
SHANK2-220ENST00000608988 HEXDCQ8WVB3 486 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 COPS5Q92905 334 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 ELMO2Q96JJ3 720 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 TBL1YQ9BQ87 522 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 APOL2Q9BQE5 337 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 LIN28AQ9H9Z2 209 aaKnown RBP22.53■■□□□ 1.2
SHANK2-220ENST00000608988 WDR6Q9NNW5 1121 aaKnown RBP22.53■■□□□ 1.2
SHANK2-220ENST00000608988 SNTG2Q9NY99 539 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 ABCD2Q9UBJ2 740 aa22.53■■□□□ 1.2
SHANK2-220ENST00000608988 ZNF236Q9UL36 1845 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 ZNF839A8K0R7 811 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 FAM72CH0Y354 149 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 PLOD2O00469 737 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 TIPRLO75663 272 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 IPO13O94829 963 aaKnown RBP22.52■■□□□ 1.2
SHANK2-220ENST00000608988 HSD17B1P14061 328 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 LMO2P25791 158 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 MERTKQ12866 999 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 ILF2Q12905 390 aaKnown RBP22.52■■□□□ 1.2
SHANK2-220ENST00000608988 PCBP1Q15365 356 aaKnown RBP eCLIP22.52■■□□□ 1.2
SHANK2-220ENST00000608988 SLC36A3Q495N2 470 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 FAM72AQ5TYM5 149 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 KIAA0930Q6ICG6 404 aaPredicted RBP22.52■■□□□ 1.2
SHANK2-220ENST00000608988 FAM72DQ6L9T8 149 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 FAM72BQ86X60 149 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 NPWQ8N729 165 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 TUBA1CQ9BQE3 449 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 GPATCH1Q9BRR8 931 aaKnown RBP22.52■■□□□ 1.2
SHANK2-220ENST00000608988 ADI1Q9BV57 179 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 AGPAT4Q9NRZ5 378 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 IGSF5Q9NSI5 407 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 CCDC167Q9P0B6 97 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 NDUFAF1Q9Y375 327 aa22.52■■□□□ 1.2
SHANK2-220ENST00000608988 SYNJ2BP-COX16A0A087WUM0 186 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 KANSL1LA0AUZ9 987 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 GOLGA8TH3BQL2 631 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 F9P00740 461 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 TKTP29401 623 aaKnown RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SLC7A2P52569 658 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 TAS2R39P59534 338 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 C16orf72Q14CZ0 275 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 ATP6AP1Q15904 470 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SV2CQ496J9 727 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SLC44A4Q53GD3 710 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 LCN8Q6JVE9 175 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 CYP2R1Q6VVX0 501 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 MFSD6LQ8IWD5 586 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 ZNF786Q8N393 782 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 B3GALNT2Q8NCR0 500 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 PNPT1Q8TCS8 783 aaKnown RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 GRIN3AQ8TCU5 1115 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SEPT8Q92599 483 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 C18orf25Q96B23 403 aaPredicted RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 TSPAN17Q96FV3 270 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 COX4I2Q96KJ9 171 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 FCRL5Q96RD9 977 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 PPP1R16BQ96T49 567 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 PRKD2Q9BZL6 878 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 COX16Q9P0S2 106 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 HCRTO43612 131 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 FASP25445 335 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 STT3AP46977 705 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 TAF6P49848 677 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 PLOD1Q02809 727 aaPredicted RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SYPL2Q5VXT5 272 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SPRED1Q7Z699 444 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 PTAR1Q7Z6K3 402 aaPredicted RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 ANKRD13AQ8IZ07 590 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SHCBP1Q8NEM2 672 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 CANT1Q8WVQ1 401 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 CENPNQ96H22 339 aaPredicted RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 CYP2S1Q96SQ9 504 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 OMDQ99983 421 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 NPLQ9BXD5 320 aaPredicted RBP22.51■■□□□ 1.19
SHANK2-220ENST00000608988 SMOXQ9NWM0 555 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 EBF1Q9UH73 591 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 TCAF1Q9Y4C2 921 aa22.51■■□□□ 1.19
SHANK2-220ENST00000608988 ZNF638Q14966 1978 aaKnown RBP22.5■■□□□ 1.19
SHANK2-220ENST00000608988 DHRS12A0PJE2 317 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 RASAL1O95294 804 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 JCHAINP01591 159 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 CKMT2P17540 419 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 PSMA4P25789 261 aaKnown RBP22.5■■□□□ 1.19
SHANK2-220ENST00000608988 CDH15P55291 814 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 ARHGAP1Q07960 439 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 FOXM1Q08050 763 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 COQ5Q5HYK3 327 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 TBCELQ5QJ74 424 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 TMTC4Q5T4D3 741 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 ELMSAN1Q6PJG2 1045 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 LARP4Q71RC2 724 aaKnown RBP eCLIP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms