RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 VOPP1Q96AW1 172 aa13.36□□□□□ -0.27
TOM1-218ENST00000608674 CENPTQ96BT3 561 aa13.36□□□□□ -0.27
TOM1-218ENST00000608674 THAP2Q9H0W7 228 aa13.36□□□□□ -0.27
TOM1-218ENST00000608674 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
TOM1-218ENST00000608674 GPR27Q9NS67 375 aa13.36□□□□□ -0.27
TOM1-218ENST00000608674 IFNKQ9P0W0 207 aa13.36□□□□□ -0.27
TOM1-218ENST00000608674 ITPR1Q14643 2758 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 COL5A1P20908 1838 aaPredicted RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 TOR1BO14657 336 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 BUB1BO60566 1050 aaPredicted RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 SSR1P43307 286 aaKnown RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 DUSP3P51452 185 aaPredicted RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 PFN3P60673 137 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 YPEL5P62699 121 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 BCL2L1Q07817 233 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 IL10RBQ08334 325 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 TARDBPQ13148 414 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOM1-218ENST00000608674 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 DPYSQ14117 519 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 LRRC14Q15048 493 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 DPYSL2Q16555 572 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 ZSCAN23Q3MJ62 389 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 TMEM52BQ4KMG9 183 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 CCDC122Q5T0U0 273 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 AFMIDQ63HM1 303 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 ALKBH5Q6P6C2 394 aaKnown RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 CAMK1DQ8IU85 385 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 ARHGAP12Q8IWW6 846 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 NPWQ8N729 165 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 ZNF548Q8NEK5 533 aaPredicted RBP13.35□□□□□ -0.27
TOM1-218ENST00000608674 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 BTN2A2Q8WVV5 523 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 NUP85Q9BW27 656 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOM1-218ENST00000608674 DKK4Q9UBT3 224 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 ANAPC7Q9UJX3 599 aa13.35□□□□□ -0.27
TOM1-218ENST00000608674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOM1-218ENST00000608674 TP53BP1Q12888 1972 aaPredicted RBP13.34□□□□□ -0.27
TOM1-218ENST00000608674 TSPAN11A1L157 253 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 K7ESM1 405 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 MYO1FO00160 1098 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 AQP9O43315 295 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 LZTS3O60299 673 aaPredicted RBP13.34□□□□□ -0.27
TOM1-218ENST00000608674 NEBLO76041 1014 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 CKMT1AP12532 417 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 AMPD1P23109 780 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 IL1R2P27930 398 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 IGFALSP35858 605 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 SCNN1BP51168 640 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 POLR2LP62875 67 aaKnown RBP13.34□□□□□ -0.27
TOM1-218ENST00000608674 NSUN2Q08J23 767 aaKnown RBP eCLIP13.34□□□□□ -0.27
TOM1-218ENST00000608674 KRT81Q14533 505 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 ZNF235Q14590 738 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 TMCO4Q5TGY1 634 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 ARHGAP36Q6ZRI8 547 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 POLNQ7Z5Q5 900 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 NSMCE1Q8WV22 266 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 TEKT4Q8WW24 435 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 NXPE2Q96DL1 559 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 ZNF599Q96NL3 588 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 SLC13A1Q9BZW2 595 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 ABCG4Q9H172 646 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 MBNL1Q9NR56 388 aaKnown RBP13.34□□□□□ -0.27
TOM1-218ENST00000608674 NCKIPSDQ9NZQ3 722 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 SPASTQ9UBP0 616 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 APOBEC3BQ9UH17 382 aaKnown RBP13.34□□□□□ -0.27
TOM1-218ENST00000608674 ATP8A1Q9Y2Q0 1164 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 COQ6Q9Y2Z9 468 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 AK5Q9Y6K8 562 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 CSNK1G3Q9Y6M4 447 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 PLXNB3Q9ULL4 1909 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 ZFHX4Q86UP3 3567 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 PTPRBP23467 1997 aa13.34□□□□□ -0.27
TOM1-218ENST00000608674 A0A087X0T9 212 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 RIOK3O14730 519 aaKnown RBP13.33□□□□□ -0.28
TOM1-218ENST00000608674 CBFA2T2O43439 604 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 GYPCP04921 128 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 CYP1A2P05177 515 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 FAM228BP0C875 321 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 RARAP10276 462 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 C6P13671 934 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 TCF4P15884 667 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 CASP14P31944 242 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 SERPINB6P35237 376 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 EIF4A3P38919 411 aaKnown RBP13.33□□□□□ -0.28
TOM1-218ENST00000608674 RGRP47804 291 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 LIG3P49916 1009 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 AP1S1P61966 158 aa13.33□□□□□ -0.28
TOM1-218ENST00000608674 EIF2B5Q13144 721 aaKnown RBP13.33□□□□□ -0.28
TOM1-218ENST00000608674 LBRQ14739 615 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms