RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CSNK1DP48730 415 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 DHCR24Q15392 516 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 ATXN7L2Q5T6C5 722 aaPredicted RBP21.74■■□□□ 1.07
USP6NL-204ENST00000606752 CNTN4Q8IWV2 1026 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 BLOC1S5Q8TDH9 187 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 BPIFB1Q8TDL5 484 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 RMDN1Q96DB5 314 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 TM6SF2Q9BZW4 377 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 EPN3Q9H201 632 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.74■■□□□ 1.07
USP6NL-204ENST00000606752 MIA3Q5JRA6 1907 aa21.74■■□□□ 1.07
USP6NL-204ENST00000606752 GOLGA8TH3BQL2 631 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 SPRP35270 261 aaPredicted RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 CSE1LP55060 971 aaKnown RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 SULT2A1Q06520 285 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 TRAF2Q12933 501 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 GET4Q7L5D6 327 aaPredicted RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 DYDC1Q8WWB3 177 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 PEX13Q92968 403 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 RBBP8Q99708 897 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 CCDC134Q9H6E4 229 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 HS3ST2Q9Y278 367 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 MYOFQ9NZM1 2061 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 SIN3BO75182 1162 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 ZWINTO95229 277 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 PDHA1P08559 390 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 CTSOP43234 321 aaPredicted RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 MAPK8P45983 427 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 THOC5Q13769 683 aaKnown RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 EML3Q32P44 896 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 KIAA0907Q7Z7F0 614 aaPredicted RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 OR13J1Q8NGT2 312 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 ATP2A3Q93084 1043 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 ISG20Q96AZ6 181 aaKnown RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 RPL10LQ96L21 214 aaKnown RBP21.73■■□□□ 1.07
USP6NL-204ENST00000606752 MLXIPLQ9NP71 852 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 OBP2AQ9NY56 170 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 FBXO10Q9UK96 956 aa21.73■■□□□ 1.07
USP6NL-204ENST00000606752 GMNCA6NCL1 334 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 ZNF821O75541 412 aaPredicted RBP21.72■■□□□ 1.07
USP6NL-204ENST00000606752 SRCP12931 536 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 HOXB8P17481 243 aaPredicted RBP21.72■■□□□ 1.07
USP6NL-204ENST00000606752 LIMK2P53671 638 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 WDR4P57081 412 aaKnown RBP21.72■■□□□ 1.07
USP6NL-204ENST00000606752 PDE1BQ01064 536 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 DGKKQ5KSL6 1271 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.72■■□□□ 1.07
USP6NL-204ENST00000606752 NAT16Q8N8M0 369 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 LPCAT1Q8NF37 534 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 APOPT1Q96IL0 206 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 MCMBPQ9BTE3 642 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 TRPV4Q9HBA0 871 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 CDH22Q9UJ99 828 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 SLC25A13Q9UJS0 675 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 RIMKLBQ9ULI2 386 aa21.72■■□□□ 1.07
USP6NL-204ENST00000606752 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ANKRD66B4E2M5 251 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 TM9SF1O15321 606 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ADH1CP00326 375 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 CYP17A1P05093 508 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 PRKCGP05129 697 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 CCNFP41002 786 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 SEC24CP53992 1094 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ECT2LQ008S8 904 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 NEPROQ6NW34 567 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ADIPOR2Q86V24 386 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 TAX1BP1Q86VP1 789 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 GABPB2Q8TAK5 448 aaPredicted RBP21.71■■□□□ 1.07
USP6NL-204ENST00000606752 TCP10LQ8TDR4 215 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ACMSDQ8TDX5 336 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 PTPRN2Q92932 1015 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 FAM167BQ9BTA0 163 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ARL5AQ9Y689 179 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 COPEO14579 308 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 SLC7A4O43246 635 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 HOXC11O43248 304 aaPredicted RBP21.71■■□□□ 1.07
USP6NL-204ENST00000606752 TIMM44O43615 452 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 FZD6O60353 706 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ASMTLO95671 621 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 CRTAMO95727 393 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 IGSF6O95976 241 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 PIRTP0C851 137 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ADH5P11766 374 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 STK19P49842 368 aaPredicted RBP21.71■■□□□ 1.07
USP6NL-204ENST00000606752 IL9RQ01113 521 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ACVR1Q04771 509 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 ADAM15Q13444 863 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 UGP2Q16851 508 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 TRIM68Q6AZZ1 485 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 AHI1Q8N157 1196 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 OR2AP1Q8NGE2 309 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 CALML6Q8TD86 181 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 STYXQ8WUJ0 223 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 PDCD6IPQ8WUM4 868 aaKnown RBP21.71■■□□□ 1.07
USP6NL-204ENST00000606752 CKAP2Q8WWK9 683 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 EVLQ9UI08 416 aaPredicted RBP21.71■■□□□ 1.07
USP6NL-204ENST00000606752 KCTD3Q9Y597 815 aa21.71■■□□□ 1.07
USP6NL-204ENST00000606752 C2orf16Q68DN1 1984 aa21.7■■□□□ 1.06
USP6NL-204ENST00000606752 HEPACAM2A8MVW5 462 aa21.7■■□□□ 1.06
USP6NL-204ENST00000606752 ALDOAP04075 364 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 392.4 ms