RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 A8MX80 341 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 AKR1B15C9JRZ8 316 aaPredicted RBP12.4□□□□□ -0.42
CTSA-210ENST00000606000 TRIM38O00635 465 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 ENC1O14682 589 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 YKT6O15498 198 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 MAGEC1O60732 1142 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 DKK1O94907 266 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 TRIM16O95361 564 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 TPM1P09493 284 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 GIMD1P0DJR0 217 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 MYF5P13349 255 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 XPAP23025 273 aaPredicted RBP12.4□□□□□ -0.42
CTSA-210ENST00000606000 SCNN1BP51168 640 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 PFN3P60673 137 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 RALGDSQ12967 914 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 PDE1CQ14123 709 aaPredicted RBP12.4□□□□□ -0.42
CTSA-210ENST00000606000 IRF4Q15306 451 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 HADHQ16836 314 aaKnown RBP12.4□□□□□ -0.42
CTSA-210ENST00000606000 UGP2Q16851 508 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 INAVAQ3KP66 663 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 TMEM52BQ4KMG9 183 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 SARM1Q6SZW1 724 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 DHRS13Q6UX07 377 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 SLC25A45Q8N413 288 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 ATPAF2Q8N5M1 289 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 LZTR1Q8N653 840 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 SLC35G2Q8TBE7 412 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 CENPTQ96BT3 561 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
CTSA-210ENST00000606000 PSKH2Q96QS6 385 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 TUBGCP5Q96RT8 1024 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 DNAJC28Q9NX36 388 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 KLF15Q9UIH9 416 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 MSRB2Q9Y3D2 182 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 HYOU1Q9Y4L1 999 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 HS3ST3A1Q9Y663 406 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 LRP4O75096 1905 aa12.4□□□□□ -0.42
CTSA-210ENST00000606000 CNOT1A5YKK6 2376 aaKnown RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 FAM149AA5PLN7 773 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 TRAFD1O14545 582 aaPredicted RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 FPGTO14772 594 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 PIAS2O75928 621 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 NEBLO76041 1014 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 TM7SF2O76062 418 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 LDOC1O95751 146 aaPredicted RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 C6P13671 934 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 CR2P20023 1033 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 DGKAP23743 735 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 SERPINA4P29622 427 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 MMP12P39900 470 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 CSNK1DP48730 415 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 ACADVLP49748 655 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 ZNF235Q14590 738 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 RFTN1Q14699 578 aaPredicted RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 PTPRRQ15256 657 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 ANKRD20A8PQ5CZ79 823 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 CFAP58Q5T655 872 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 RBFAQ8N0V3 343 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 TC2NQ8N9U0 490 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 KCTD6Q8NC69 237 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 ECHDC3Q96DC8 303 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 ZNF641Q96N77 438 aaPredicted RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 ZNF599Q96NL3 588 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 TCEAL2Q9H3H9 227 aaPredicted RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 ATP13A3Q9H7F0 1226 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 ATP8A1Q9Y2Q0 1164 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 PCDHGC4Q9Y5F7 938 aa12.39□□□□□ -0.43
CTSA-210ENST00000606000 TDRD6O60522 2096 aaKnown RBP12.39□□□□□ -0.43
CTSA-210ENST00000606000 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 SIGLEC6O43699 453 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 PROS1P07225 676 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 GM2AP17900 193 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 MAN1A1P33908 653 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 SERPINB6P35237 376 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 MMP13P45452 471 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 RABIFP47224 123 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 LIG3P49916 1009 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 GBE1Q04446 702 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 GALNT2Q10471 571 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 SLC10A2Q12908 348 aaPredicted RBP12.38□□□□□ -0.43
CTSA-210ENST00000606000 TRAF2Q12933 501 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 EIF2B5Q13144 721 aaKnown RBP12.38□□□□□ -0.43
CTSA-210ENST00000606000 GRM3Q14832 879 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 PAFAH1B3Q15102 231 aaKnown RBP12.38□□□□□ -0.43
CTSA-210ENST00000606000 WSCD2Q2TBF2 565 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 PROX2Q3B8N5 592 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 ZFYVE27Q5T4F4 411 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 BRAT1Q6PJG6 821 aa12.38□□□□□ -0.43
CTSA-210ENST00000606000 PARGQ86W56 976 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms