RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 E2F5Q15329 346 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 DHCR24Q15392 516 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TAF1AQ15573 450 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 DBN1Q16643 649 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CTC1Q2NKJ3 1217 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LRIT3Q3SXY7 679 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FUT11Q495W5 492 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TCEAL5Q5H9L2 206 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FAM78AQ5JUQ0 283 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FAM182AQ5T1J6 154 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CES5AQ6NT32 575 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SH2D5Q6ZV89 423 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CCDC91Q7Z6B0 441 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 C12orf76Q8N812 135 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 OR2AP1Q8NGE2 309 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ING5Q8WYH8 240 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SELENOSQ9BQE4 189 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MFSD1Q9H3U5 465 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ATP13A3Q9H7F0 1226 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PPANQ9NQ55 473 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 C20orf96Q9NUD7 363 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PIH1D1Q9NWS0 290 aaKnown RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CORO1CQ9ULV4 474 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ANKRD66B4E2M5 251 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LDB2O43679 373 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PRLP01236 227 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SRCP12931 536 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CHN1P15882 459 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 KRT4P19013 534 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FCARP24071 287 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LSP1P33241 339 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CHRNA4P43681 627 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 GNGT1P63211 74 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ECT2LQ008S8 904 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RAD51Q06609 339 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 INSCQ1MX18 579 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LINGO4Q6UY18 593 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RGS9BPQ6ZS82 235 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 GPR150Q8NGU9 434 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 LRIG1Q96JA1 1093 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ZNF641Q96N77 438 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NECTIN4Q96NY8 510 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FAM83CQ9BQN1 747 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TRIM56Q9BRZ2 755 aaKnown RBP12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RHOJQ9H4E5 214 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ZNF576Q9H609 170 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ZFP14Q9HCL3 533 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PLK2Q9NYY3 685 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 WNT6Q9Y6F9 365 aa12.37□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 C2orf81A6NN90 581 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 HEPACAM2A8MVW5 462 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 H7C0S8 307 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TRAFD1O14545 582 aaPredicted RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ZNF821O75541 412 aaPredicted RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RFPL1O75677 317 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PGLSO95336 258 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ATP5BP06576 529 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 GSTA1P08263 222 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ERVK-10P10266 1014 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 POLR2EP19388 210 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 OGNP20774 298 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NFKBIAP25963 317 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ARNTP27540 789 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SERPINA4P29622 427 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NNMTP40261 264 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 DGKGP49619 791 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 RGS19P49795 217 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SERPINB8P50452 374 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NEK3P51956 506 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ZNF140P52738 457 aaPredicted RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 IL9RQ01113 521 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 BCL2L1Q07817 233 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TRAF2Q12933 501 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 THOC5Q13769 683 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SEPT6Q14141 434 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 CBX2Q14781 532 aaPredicted RBP12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 HSP90AA5PQ58FG0 334 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ARMC12Q5T9G4 340 aa12.36□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ESRP1Q6NXG1 681 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms