RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PON2Q15165 354 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 EFHC2Q5JST6 749 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 Q5PR19 223 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF658Q5TYW1 1059 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CACHD1Q5VU97 1274 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GARNL3Q5VVW2 1013 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SHEQ5VZ18 495 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PLA2G4FQ68DD2 849 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM171BQ6P995 826 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 BEND4Q6ZU67 534 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 MMAAQ8IVH4 418 aaKnown RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 NKAIN4Q8IVV8 208 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CRIPAKQ8N1N5 446 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 AGGF1Q8N302 714 aaeCLIP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 MPP5Q8N3R9 675 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC15A4Q8N697 577 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 LPCAT1Q8NF37 534 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 OR52E1Q8NGJ3 308 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PYROXD1Q8WU10 500 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ROBO4Q8WZ75 1007 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 CAVIN3Q969G5 261 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM149B1Q96BN6 582 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 PDCD2LQ9BRP1 358 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 RAB17Q9H0T7 212 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 IL25Q9H293 177 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 GPRC5CQ9NQ84 441 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SEC31BQ9NQW1 1179 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC39A1Q9NY26 324 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SENP1Q9P0U3 644 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF70Q9UC06 446 aaPredicted RBP5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 OGDHLQ9ULD0 1010 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ERVK-11Q9UQG0 969 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 ABCC12Q96J65 1359 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SPATA31A5Q5VU36 1347 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 SPATA31A7Q8IWB4 1347 aa5.08□□□□□ -1.6
SPTBN1-206ENST00000602898 TRBV23OR9-2A0A075B6M9 112 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PSMA7O14818 248 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RGS13O14921 159 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ALOX15BO15296 676 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 TADA2AO75478 443 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 METTL18O95568 372 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RETP07949 1114 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FHP07954 510 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 YBX3P16989 372 aaKnown RBP eCLIP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 VCLP18206 1134 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 EDNRBP24530 442 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CASP14P31944 242 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 BMPR1AP36894 532 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 VHLP40337 213 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ME1P48163 572 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ARSDP51689 593 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ALDH18A1P54886 795 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 YWHAZP63104 245 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNJ2P63252 427 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FMO1Q01740 532 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PTK6Q13882 451 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GPR68Q15743 365 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GLRA4Q5JXX5 417 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SPDYAQ5MJ70 313 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GALNT18Q6P9A2 607 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 TRAPPC11Q7Z392 1133 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GPR142Q7Z601 462 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ST13P4Q8IZP2 240 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 HDDC3Q8N4P3 179 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ATP6V0D2Q8N8Y2 350 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ANKFN1Q8N957 763 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RNF169Q8NCN4 708 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FLAD1Q8NFF5 587 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 TTLQ8NG68 377 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 HASPINQ8TF76 798 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CNOT6LQ96LI5 555 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FCRL4Q96PJ5 515 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NAPGQ99747 312 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RBM4BQ9BQ04 359 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NEURL2Q9BR09 285 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RBM4Q9BWF3 364 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CYP3A43Q9HB55 503 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ABI2Q9NYB9 513 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ASIC3Q9UHC3 531 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PPM1HQ9ULR3 514 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CAPN11Q9UMQ6 739 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 IFT52Q9Y366 437 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PTRH2Q9Y3E5 179 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RWDD3Q9Y3V2 267 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 BRCA1P38398 1863 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SALL3Q9BXA9 1300 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PVALEFA0A1B0GWK0 134 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 A8MXE2 369 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 HSBP1L1C9JCN9 74 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GCOM1H8Y6P7 765 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PLK4O00444 970 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GPC4O75487 556 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 AK1P00568 194 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ITGB3P05106 788 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 THP07101 528 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ACAA1P09110 424 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ALOX5P09917 674 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RARAP10276 462 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms