RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CFAP69A5D8W1 941 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 FAM47DPA6NHR8 397 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 UPK3BL1B0FP48 263 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 UPK3BL2E5RIL1 263 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 STK10O94804 968 aaKnown RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 PGLSO95336 258 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 ATP1A1P05023 1023 aaKnown RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 IGHV4-34P06331 123 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 MMP2P08253 660 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 XPAP23025 273 aaPredicted RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 STIP1P31948 543 aaKnown RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 CXCR5P32302 372 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 ABL2P42684 1182 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 RPL26P61254 145 aaKnown RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 SKOR1P84550 965 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 ELP6Q0PNE2 266 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 TRAF2Q12933 501 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 IHHQ14623 411 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 CCNG2Q16589 344 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 ARMC12Q5T9G4 340 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 PEAR1Q5VY43 1037 aaPredicted RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 DRICH1Q6PGQ1 229 aaPredicted RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 CYP2U1Q7Z449 544 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 RABEPKQ7Z6M1 372 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 ZNF567Q8N184 647 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 RUBCNQ92622 972 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 OSBPL9Q96SU4 736 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 NAP1L3Q99457 506 aaPredicted RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 PILRBQ9UKJ0 227 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 PHTF1Q9UMS5 762 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 SNX12Q9UMY4 172 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 RPL26L1Q9UNX3 145 aaKnown RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 RAI2Q9Y5P3 530 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
RNF40-212ENST00000602784 EP300Q09472 2414 aaPredicted RBP13.99□□□□□ -0.17
RNF40-212ENST00000602784 C5orf60A6NFR6 353 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 MEI4A8MW99 385 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 KCNN4O15554 427 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 SPINT1O43278 529 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 LIASO43766 372 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 FZD6O60353 706 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 OPHN1O60890 802 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 FSBPO95073 299 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 PCDH8O95206 1070 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 TCP1P17987 556 aaKnown RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 ITPKAP23677 461 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 NFKBIAP25963 317 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 CD27P26842 260 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 CD68P34810 354 aaPredicted RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 CD86P42081 329 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 RPS21P63220 83 aaKnown RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 CREB5Q02930 508 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 SIX1Q15475 284 aaPredicted RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 OASLQ15646 514 aaKnown RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 TMEM52BQ4KMG9 183 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 TMEM259Q4ZIN3 620 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 KIAA1161Q6NSJ0 714 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 ERAP2Q6P179 960 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 ASCL5Q7RTU5 278 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 PID1Q7Z2X4 250 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 PRPF39Q86UA1 669 aaKnown RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 ZSWIM9Q86XI8 627 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 C1orf216Q8TAB5 229 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 ASB12Q8WXK4 309 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 SPATA13Q96N96 652 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 FCRL5Q96RD9 977 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 WDR24Q96S15 920 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 CEP41Q9BYV8 373 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 PCDH12Q9NPG4 1184 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 VPS45Q9NRW7 570 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 KLHL8Q9P2G9 620 aaPredicted RBP13.98□□□□□ -0.17
RNF40-212ENST00000602784 NCDNQ9UBB6 729 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 SUSD2Q9UGT4 822 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 DNPEPQ9ULA0 475 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 DMTF1Q9Y222 760 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 PPIL1Q9Y3C6 166 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 MYO15AQ9UKN7 3530 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 ANKRD36A6QL64 1941 aa13.98□□□□□ -0.17
RNF40-212ENST00000602784 TNRC6BQ9UPQ9 1833 aaKnown RBP13.97□□□□□ -0.17
RNF40-212ENST00000602784 ZNF292O60281 2723 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 A0A1W2PPC4 97 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 A0A1W2PQU0 124 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 NEMP1O14524 444 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 RNGTTO60942 597 aaKnown RBP13.97□□□□□ -0.17
RNF40-212ENST00000602784 GCATO75600 419 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 EPOP01588 193 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 ITGAVP06756 1048 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 PLA2G5P39877 138 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 MMP12P39900 470 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
RNF40-212ENST00000602784 SETMARQ53H47 684 aaPredicted RBP13.97□□□□□ -0.17
RNF40-212ENST00000602784 PLA2G2CQ5R387 149 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms