RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 FEM1CQ96JP0 617 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 SUV39H2Q9H5I1 410 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 PPM1HQ9ULR3 514 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 PCDHB9Q9Y5E1 797 aa23.12■■□□□ 1.29
IRF3-227ENST00000600911 PGLSO95336 258 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 HOXB2P14652 356 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 CES1P23141 567 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 SEMG2Q02383 582 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 FBXO43Q4G163 708 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 CERCAMQ5T4B2 595 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 LRRC8BQ6P9F7 803 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 MMAAQ8IVH4 418 aaKnown RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 IGDCC3Q8IVU1 814 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 ZCCHC9Q8N567 271 aaKnown RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 BBOF1Q8ND07 529 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 LPCAT1Q8NF37 534 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 UHRF1Q96T88 793 aaPredicted RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 FSD1LQ9BXM9 530 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 MKRN2Q9H000 416 aaKnown RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 ATP13A3Q9H7F0 1226 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 SUN2Q9UH99 717 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 ERI2A8K979 691 aaKnown RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 SESN2P58004 480 aaPredicted RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 DHX9Q08211 1270 aaKnown RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 ELAVL3Q14576 367 aaKnown RBP23.11■■□□□ 1.29
IRF3-227ENST00000600911 DENND2CQ68D51 928 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 GDPD4Q6W3E5 623 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 PIP4K2CQ8TBX8 421 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 KCNV2Q8TDN2 545 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 TUBGCP5Q96RT8 1024 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 SPO11Q9Y5K1 396 aa23.11■■□□□ 1.29
IRF3-227ENST00000600911 SCN8AQ9UQD0 1980 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 LRRK1Q38SD2 2015 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.1■■□□□ 1.29
IRF3-227ENST00000600911 ALPIP09923 528 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 CTPS1P17812 591 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 MGAT1P26572 445 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 QPCTQ16769 361 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 NAPEPLDQ6IQ20 393 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 PPP1R21Q6ZMI0 780 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 TRIM67Q6ZTA4 783 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 FLCNQ8NFG4 579 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 OR8D1Q8WZ84 308 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 RUBCNQ92622 972 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 IFT43Q96FT9 208 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 HAUS2Q9NVX0 235 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 SYBUQ9NX95 663 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 MMP17Q9ULZ9 603 aa23.1■■□□□ 1.29
IRF3-227ENST00000600911 BPTFQ12830 3046 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 NPC1O15118 1278 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 PSMD3O43242 534 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 SOCS5O75159 536 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 NDST3O95803 873 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 SERPINA4P29622 427 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 CDK16Q00536 496 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 ARMC12Q5T9G4 340 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 CWF19L1Q69YN2 538 aaKnown RBP23.09■■□□□ 1.29
IRF3-227ENST00000600911 PJA1Q8NG27 643 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 SHDQ96IW2 340 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 SIGLEC10Q96LC7 697 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 FMO2Q99518 471 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 RSPH9Q9H1X1 276 aaPredicted RBP23.09■■□□□ 1.29
IRF3-227ENST00000600911 ARNT2Q9HBZ2 717 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 CD93Q9NPY3 652 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 NCOR1O75376 2440 aa23.09■■□□□ 1.29
IRF3-227ENST00000600911 GOLGA6CA6NDK9 693 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 GOLGA6BA6NDN3 693 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 AURKAO14965 403 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 IL1BP01584 269 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 GOLGA6DP0CG33 693 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 MAPK8P45983 427 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 PSMD8P48556 350 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 BBS9Q3SYG4 887 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 PARS2Q7L3T8 475 aaKnown RBP23.08■■□□□ 1.29
IRF3-227ENST00000600911 CCDC25Q86WR0 208 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 AENQ8WTP8 325 aaKnown RBP23.08■■□□□ 1.29
IRF3-227ENST00000600911 PPP1R2P1Q96PQ5 205 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 PLAC1Q9HBJ0 212 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 GOLGA6AQ9NYA3 693 aa23.08■■□□□ 1.29
IRF3-227ENST00000600911 NUMA1Q14980 2115 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 TSPAN11A1L157 253 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 E7ESA3 106 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 KPNA3O00505 521 aaPredicted RBP23.08■■□□□ 1.28
IRF3-227ENST00000600911 SPINT1O43278 529 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 DCNP07585 359 aaKnown RBP23.08■■□□□ 1.28
IRF3-227ENST00000600911 SATB1Q01826 763 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 CAV1Q03135 178 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 RAD51Q06609 339 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 HIF1AQ16665 826 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 CCDC38Q502W7 563 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 ANKMY2Q8IV38 441 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 DNAAF3Q8N9W5 541 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 TMIEQ8NEW7 156 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 RMDN1Q96DB5 314 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 SERGEFQ9UGK8 458 aa23.08■■□□□ 1.28
IRF3-227ENST00000600911 ANKRD66B4E2M5 251 aa23.07■■□□□ 1.28
IRF3-227ENST00000600911 PI15O43692 258 aa23.07■■□□□ 1.28
IRF3-227ENST00000600911 CPP00450 1065 aa23.07■■□□□ 1.28
IRF3-227ENST00000600911 EPOP01588 193 aa23.07■■□□□ 1.28
IRF3-227ENST00000600911 TIMP2P16035 220 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms