RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 C10orf67Q8IYJ2 551 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 RMDN1Q96DB5 314 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 ASIC4Q96FT7 647 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 RPL10LQ96L21 214 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 FAM83CQ9BQN1 747 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 TM6SF2Q9BZW4 377 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 SSU72Q9NP77 194 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 NSMCE4AQ9NXX6 385 aa17.79■□□□□ 0.44
SHKBP1-224ENST00000600718 CCDC78A2IDD5 438 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 ZNF821O75541 412 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 CISD3P0C7P0 127 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 GP5P40197 560 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 ARCN1P48444 511 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 SNRPD1P62314 119 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 TRAF2Q12933 501 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 DNAJC3Q13217 504 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 CNGA3Q16281 694 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 DGKKQ5KSL6 1271 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 MBLAC2Q68D91 279 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 MDM1Q8TC05 714 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 WFIKKN2Q8TEU8 576 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 PEX13Q92968 403 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 CENPTQ96BT3 561 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 ALKBH8Q96BT7 664 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 IL1RAPL1Q9NZN1 696 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 RIMKLBQ9ULI2 386 aa17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 SMG5Q9UPR3 1016 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-224ENST00000600718 TMEM120BA0PK00 339 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 TRIM49D1C9J1S8 452 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 VAPBO95292 243 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 ARSAP15289 507 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 CHN1P15882 459 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 KRT4P19013 534 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 MTHFRP42898 656 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 DGKGP49619 791 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 STK19P49842 368 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 SLC18A1P54219 525 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 MFSD6LQ8IWD5 586 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 OR2AP1Q8NGE2 309 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 BLOC1S5Q8TDH9 187 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 MYADMQ96S97 322 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 IARS2Q9NSE4 1012 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 SLC2A6Q9UGQ3 507 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 SLC27A6Q9Y2P4 619 aa17.77■□□□□ 0.44
SHKBP1-224ENST00000600718 TMEM265A0A087WTH1 108 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 ANKRD66B4E2M5 251 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 PRPF4O43172 522 aaKnown RBP eCLIP17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 LDB2O43679 373 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 FZD6O60353 706 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 SHOX2O60902 331 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 CRTAMO95727 393 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 GSRP00390 522 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 PDHA1P08559 390 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 GUCY1A3Q02108 690 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 BCL2L1Q07817 233 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 VITQ6UXI7 678 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 TIFABQ6ZNK6 161 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 PCDH20Q8N6Y1 951 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 LPCAT1Q8NF37 534 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 GABPB2Q8TAK5 448 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 AGAP2Q99490 1192 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 EBF3Q9H4W6 596 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 CLDND1Q9NY35 253 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 EVLQ9UI08 416 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 PSAT1Q9Y617 370 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 MTCH2Q9Y6C9 303 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 CEP290O15078 2479 aa17.77■□□□□ 0.43
SHKBP1-224ENST00000600718 SIN3BO75182 1162 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 TBX10O75333 385 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 POU3F3P20264 500 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 RGS19P49795 217 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 VASPP50552 380 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 RPL26P61254 145 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 GNGT1P63211 74 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 DLX2Q07687 328 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 THOC5Q13769 683 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 C22orf39Q6P5X5 142 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 STRA8Q7Z7C7 330 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 CNTN4Q8IWV2 1026 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 PLPP6Q8IY26 295 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 C4orf33Q8N1A6 199 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 ZFYVE19Q96K21 471 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 TNKS2Q9H2K2 1166 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 ATP13A3Q9H7F0 1226 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 ECT2Q9H8V3 914 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 INTS9Q9NV88 658 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 NKIRAS1Q9NYS0 192 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 SLC17A6Q9P2U8 582 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 RPL26L1Q9UNX3 145 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 ERVW-1Q9UQF0 538 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 MIA3Q5JRA6 1907 aa17.76■□□□□ 0.43
SHKBP1-224ENST00000600718 FAM47DPA6NHR8 397 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SOCS5O75159 536 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ASLP04424 464 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 ARNTP27540 789 aa17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 SPRP35270 261 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-224ENST00000600718 CSE1LP55060 971 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms