RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SERAC1Q96JX3 654 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 EXOC2Q96KP1 924 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 CALR3Q96L12 384 aaKnown RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 KLHL32Q96NJ5 620 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 NUDCD1Q96RS6 583 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 SLC17A9Q9BYT1 436 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 SLC32A1Q9H598 525 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 GAREM1Q9H706 876 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 SEPT3Q9UH03 358 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 SNX11Q9Y5W9 270 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 DUSP10Q9Y6W6 482 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 TDRD6O60522 2096 aaKnown RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 USP24Q9UPU5 2620 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 A0A1B0GTQ1 180 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 H0Y8X5 98 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 DFFAO00273 331 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 MATN3O15232 486 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 RAD51BO15315 384 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 SOCS5O75159 536 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 PIGNO95427 931 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 CER1O95813 267 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 ITIH2P19823 946 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 HNRNPA2B1P22626 353 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 PMLP29590 882 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 MAT2AP31153 395 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 PEX5P50542 639 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 DNA2P51530 1060 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 RENBPP51606 427 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 IFI35P80217 286 aaPredicted RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 SHC2P98077 582 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 ADCY2Q08462 1091 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 PPIDQ08752 370 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 RALGDSQ12967 914 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 IFI16Q16666 785 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 FBXL19Q6PCT2 694 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 MFSD7Q6UXD7 560 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 GCNT7Q6ZNI0 430 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 RHOT1Q8IXI2 618 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 SLC22A18ASQ8N1D0 253 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 ATPAF2Q8N5M1 289 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 KCTD6Q8NC69 237 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 ARRDC2Q8TBH0 407 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 SAP25Q8TEE9 199 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 MCCC1Q96RQ3 725 aaPredicted RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 IL12RB2Q99665 862 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 CALN1Q9BXU9 219 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 GOLPH3Q9H4A6 298 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 SP110Q9HB58 689 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 NOD2Q9HC29 1040 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 DYRK4Q9NR20 520 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 TM7SF3Q9NS93 570 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 KLHL11Q9NVR0 708 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 DDX56Q9NY93 547 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 ITM2BQ9Y287 266 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 ATP8A1Q9Y2Q0 1164 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 PLXNB3Q9ULL4 1909 aa8.87□□□□□ -0.99
SSBP4-208ENST00000600628 MAP1BP46821 2468 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 DSPP15924 2871 aaKnown RBP8.87□□□□□ -0.99
SSBP4-208ENST00000600628 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 FAM221BA6H8Z2 402 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 POM121BA6NF01 834 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 IGLON5A6NGN9 336 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 KCNK3O14649 394 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 SH3BP5O60239 455 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 PRLP01236 227 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 GIMD1P0DJR0 217 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 PRLRP16471 622 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 MX2P20592 715 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 CES1P23141 567 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 CTNNA1P35221 906 aaKnown RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 PTPN7P35236 360 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 VAV2P52735 878 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 PFN3P60673 137 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 FAM193AP78312 1265 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 KRT81Q14533 505 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 SPA17Q15506 151 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 MARC1Q5VT66 337 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 LIPIQ6XZB0 460 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 KYAT3Q6YP21 454 aaKnown RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 TTC7BQ86TV6 843 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 CNTD1Q8N815 330 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 TP53I13Q8NBR0 393 aaPredicted RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 ACRBPQ8NEB7 543 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 KRT35Q92764 455 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 SKA1Q96BD8 255 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 ELF4Q99607 663 aaPredicted RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 BAG1Q99933 345 aaPredicted RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
SSBP4-208ENST00000600628 ATP13A3Q9H7F0 1226 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 PCDH12Q9NPG4 1184 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 TOR4AQ9NXH8 423 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 PCOLCE2Q9UKZ9 415 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 EFR3BQ9Y2G0 817 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 HYOU1Q9Y4L1 999 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 ASXL3Q9C0F0 2248 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 SCN8AQ9UQD0 1980 aa8.86□□□□□ -0.99
SSBP4-208ENST00000600628 IGF2RP11717 2491 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms