RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FBXL19Q6PCT2 694 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 BRAT1Q6PJG6 821 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 TTC7BQ86TV6 843 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 SPATA22Q8NHS9 363 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 PIH1D2Q8WWB5 315 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 RAB7BQ96AH8 199 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 PPP1R16AQ96I34 528 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 MS4A14Q96JA4 679 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 PBKQ96KB5 322 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 HSPA12BQ96MM6 686 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 SMIM14Q96QK8 99 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 ITM2BQ9Y287 266 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 RAI2Q9Y5P3 530 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 RALGAPA1Q6GYQ0 2036 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 PIEZO1Q92508 2521 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 CACNA1EQ15878 2313 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 PLXNA2O75051 1894 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3DA0A087WVF3 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3IA0A087WXS9 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3EA0A087X179 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3KA0A087X1G2 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3FA6NER0 549 aaPredicted RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 LRRC72A6NJI9 287 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3LB9A6J9 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 RIOK3O14730 519 aaKnown RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 PGLSO95336 258 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 PRKCGP05129 697 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 RETP07949 1114 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3HP0C7X1 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 PRLRP16471 622 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 SERPINA4P29622 427 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 DHPSP49366 369 aaPredicted RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 CCR5P51681 352 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 GDF10P55107 478 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 ITKQ08881 620 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 FGL2Q14314 439 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 ELF2Q15723 593 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 CCNG2Q16589 344 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TMEM52BQ4KMG9 183 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3GQ6DHY5 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3CQ6IPX1 549 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 NEK5Q6P3R8 708 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 DARS2Q6PI48 645 aaKnown RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 ARMCX6Q7L4S7 300 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TRIM69Q86WT6 500 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 KLHDC8BQ8IXV7 354 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TBC1D3Q8IZP1 549 aaPredicted RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 CBARPQ8N350 705 aaPredicted RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 DCLK2Q8N568 766 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.85□□□□□ -0.19
VRK3-219ENST00000600137 PRELID2Q8N945 189 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 FOXJ1Q92949 421 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TRIB3Q96RU7 358 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 RBM15Q96T37 977 aaKnown RBP eCLIP13.85□□□□□ -0.19
VRK3-219ENST00000600137 VAT1Q99536 393 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 TDRD1Q9BXT4 1180 aaKnown RBP13.85□□□□□ -0.19
VRK3-219ENST00000600137 PREBQ9HCU5 417 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 PCDH12Q9NPG4 1184 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 DYRK4Q9NR20 520 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 SMARCAL1Q9NZC9 954 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 PILRBQ9UKJ0 227 aa13.85□□□□□ -0.19
VRK3-219ENST00000600137 C5orf60A6NFR6 353 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 FAM47DPA6NHR8 397 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 UPK3BL1B0FP48 263 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 UPK3BL2E5RIL1 263 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 CES2O00748 559 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 WNT9AO14904 365 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 ZNF185O15231 689 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 KCNN4O15554 427 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 RNGTTO60942 597 aaKnown RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 NFKB1P19838 968 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 CD86P42081 329 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 SUOXP51687 545 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 SEMG2Q02383 582 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 RALGDSQ12967 914 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 SLC14A2Q15849 920 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 ZNF284Q2VY69 593 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 ANKRD20A2Q5SQ80 823 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 ANKRD20A1Q5TYW2 823 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 ANKRD20A3Q5VUR7 823 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 SEL1L3Q68CR1 1132 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 DRICH1Q6PGQ1 229 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 KDELC1Q6UW63 502 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 NYAP1Q6ZVC0 841 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 RTP4Q96DX8 246 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 OXNAD1Q96HP4 312 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 FCRL5Q96RD9 977 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 MCCC1Q96RQ3 725 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 TMEM121Q9BTD3 319 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 C1QTNF2Q9BXJ5 285 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 FRMD8P1Q9BZ68 369 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 ARRDC1-AS1Q9H2J1 176 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms