RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 PHTF2Q8N3S3 785 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 TRMT61BQ9BVS5 477 aaKnown RBP23.53■■□□□ 1.36
SYMPK-212ENST00000598896 DEC1Q9P2X7 70 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 ARIH1Q9Y4X5 557 aaPredicted RBP23.53■■□□□ 1.36
SYMPK-212ENST00000598896 FAM169AQ9Y6X4 670 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 FAM159BA6NKW6 160 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 FOXO6A8MYZ6 492 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 PRRT4C9JH25 899 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 OPRD1P41143 372 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 CSNK1DP48730 415 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 KDSRQ06136 332 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 HTR4Q13639 388 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 DLG2Q15700 870 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 CYS1Q717R9 158 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 MTSS1LQ765P7 747 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 CAMK1DQ8IU85 385 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 SFTPA1Q8IWL2 248 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.53■■□□□ 1.36
SYMPK-212ENST00000598896 PPHLN1Q8NEY8 458 aaKnown RBP23.53■■□□□ 1.36
SYMPK-212ENST00000598896 WFIKKN2Q8TEU8 576 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 SMIM14Q96QK8 99 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 PRKAG3Q9UGI9 489 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 LGALS13Q9UHV8 139 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 SLC24A2Q9UI40 661 aa23.53■■□□□ 1.36
SYMPK-212ENST00000598896 NOVA2Q9UNW9 492 aaKnown RBP23.53■■□□□ 1.36
SYMPK-212ENST00000598896 FZD6O60353 706 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 PIGNO95427 931 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 IGSF6O95976 241 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 PIRTP0C851 137 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 ADRA1DP25100 572 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 SEPT6Q14141 434 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 AGBL2Q5U5Z8 902 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 PDCD6IPQ8WUM4 868 aaKnown RBP23.52■■□□□ 1.36
SYMPK-212ENST00000598896 DCAKDQ8WVC6 231 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 TLCD1Q96CP7 247 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 CEP44Q9C0F1 390 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 SLC17A6Q9P2U8 582 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 SLC2A6Q9UGQ3 507 aa23.52■■□□□ 1.36
SYMPK-212ENST00000598896 HMGB1P1B2RPK0 211 aaPredicted RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 ANHXE9PGG2 379 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 BNIP3LO60238 219 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 UGT1A9O60656 530 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 GRAMD4Q6IC98 578 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 Q6ZVU0 165 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 CTAGE3PQ8IX95 158 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 PCDH20Q8N6Y1 951 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 PPM1NQ8N819 430 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 LPCAT1Q8NF37 534 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 PTCD2Q8WV60 388 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 SLC44A1Q8WWI5 657 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 CERS2Q96G23 380 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 RANBP9Q96S59 729 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 UGT1A7Q9HAW7 530 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 UGT1A10Q9HAW8 530 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 UGT1A8Q9HAW9 530 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 MRM3Q9HC36 420 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 PPANQ9NQ55 473 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 MUC22E2RYF6 1773 aaPredicted RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 DLDP09622 509 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 ERVK-10P10266 1014 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 SNRPD1P62314 119 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 NR1H3Q13133 447 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 ESRP1Q6NXG1 681 aaKnown RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 RYBPQ8N488 228 aaPredicted RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 FRS2Q8WU20 508 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 RMDN1Q96DB5 314 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 UBE2ZQ9H832 354 aaPredicted RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 PPCSQ9HAB8 311 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 TREX1Q9NSU2 369 aa23.51■■□□□ 1.35
SYMPK-212ENST00000598896 PSMC3IPQ9P2W1 217 aaPredicted RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 HECAQ9UBI9 543 aaPredicted RBP23.51■■□□□ 1.35
SYMPK-212ENST00000598896 HEATR9A2RTY3 570 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 TTC34A8MYJ7 566 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 TRAFD1O14545 582 aaPredicted RBP23.5■■□□□ 1.35
SYMPK-212ENST00000598896 FAM155BO75949 473 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 GSRP00390 522 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 ALADP13716 330 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 CCNHP51946 323 aaPredicted RBP23.5■■□□□ 1.35
SYMPK-212ENST00000598896 TMED2Q15363 201 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 ADGRD1Q6QNK2 874 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 DPY19L3Q6ZPD9 716 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 LRRC6Q86X45 466 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 RIBC1Q8N443 379 aaPredicted RBP23.5■■□□□ 1.35
SYMPK-212ENST00000598896 BLOC1S5Q8TDH9 187 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 CDX2Q99626 313 aaPredicted RBP23.5■■□□□ 1.35
SYMPK-212ENST00000598896 ELOVL2Q9NXB9 296 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 PCDHB9Q9Y5E1 797 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 SPO11Q9Y5K1 396 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 TICRRQ7Z2Z1 1910 aa23.5■■□□□ 1.35
SYMPK-212ENST00000598896 ANKRD66B4E2M5 251 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 POLR3GO15318 223 aaPredicted RBP23.49■■□□□ 1.35
SYMPK-212ENST00000598896 LDB2O43679 373 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 ATP5BP06576 529 aaKnown RBP23.49■■□□□ 1.35
SYMPK-212ENST00000598896 MSH2P43246 934 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 MAPK8P45983 427 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 MAGOHP61326 146 aaKnown RBP23.49■■□□□ 1.35
SYMPK-212ENST00000598896 PTPRRQ15256 657 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 RASA2Q15283 850 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 CARD16Q5EG05 197 aa23.49■■□□□ 1.35
SYMPK-212ENST00000598896 MICALCLQ6ZW33 695 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms