RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 DPY19L2P1Q6NXN4 242 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 FAM131BQ86XD5 332 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 XYLT1Q86Y38 959 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 TP53I13Q8NBR0 393 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 WDR48Q8TAF3 677 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 IQCDQ96DY2 449 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 LIN37Q96GY3 246 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 TBATAQ96M53 351 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 KLHL32Q96NJ5 620 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 MAGEB5Q9BZ81 275 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 SLC13A1Q9BZW2 595 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 SYNDIG1Q9H7V2 258 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 PPARGC1AQ9UBK2 798 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 IL17BQ9UHF5 180 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 PCDHGA7Q9Y5G6 932 aa16.67■□□□□ 0.26
SHKBP1-215ENST00000597649 NBPF19A0A087WUL8 3843 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 KRIT1O00522 736 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 EPHB6O15197 1021 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 UGT2B4P06133 528 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 TPM1P09493 284 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 ITGB6P18564 788 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 CDH5P33151 784 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 STAT1P42224 750 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 CSRP3P50461 194 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 ZNF75DP51815 510 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 THOP1P52888 689 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 YPEL5P62699 121 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 PTK2BQ14289 1009 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 TCEA2Q15560 299 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 MYLK3Q32MK0 819 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 ATXN7L2Q5T6C5 722 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 ACBD5Q5T8D3 534 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 RAB11FIP2Q7L804 512 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 FAM71AQ8IYT1 594 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 RYBPQ8N488 228 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 FBXO39Q8N4B4 442 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 KYQ8NBH2 561 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 EXTL1Q92935 676 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 ARHGEF2Q92974 986 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 C18orf8Q96DM3 657 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 CFAP57Q96MR6 1250 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 NAA15Q9BXJ9 866 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 SIRPGQ9P1W8 387 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 TMEM59LQ9UK28 342 aa16.66■□□□□ 0.26
SHKBP1-215ENST00000597649 LRRK2Q5S007 2527 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 A0A1W2PQM1 296 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 TIMP2P16035 220 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 SCNN1AP37088 669 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 PBX1P40424 430 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 BPIFB4P59827 614 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 PPARDQ03181 441 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 SPECC1LQ69YQ0 1117 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 SMYD5Q6GMV2 418 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 ESRP1Q6NXG1 681 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 MACC1Q6ZN28 852 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 TTC7BQ86TV6 843 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 NLRP14Q86W24 1093 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 NETO2Q8NC67 525 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 OR2AP1Q8NGE2 309 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 CPLX3Q8WVH0 158 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 TSACCQ96A04 125 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 CCDC74AQ96AQ1 378 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 EDEM3Q9BZQ6 932 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 STARD5Q9NSY2 213 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 PAXBP1Q9Y5B6 917 aa16.65■□□□□ 0.26
SHKBP1-215ENST00000597649 UNC13CQ8NB66 2214 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 F8VZ95 297 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 FAM72CH0Y354 149 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 TERTO14746 1132 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 GJB6O95452 261 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 POP4O95707 220 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 GSRP00390 522 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 CCDC172P0C7W6 258 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 SOX5P35711 763 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 TRIM14Q14142 442 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 FIGNQ5HY92 759 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 MANEALQ5VSG8 457 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 KCTD16Q68DU8 428 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 FAM72BQ86X60 149 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 VSTM4Q8IW00 320 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 SDR16C5Q8N3Y7 309 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 ARL10Q8N8L6 244 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 TMEM35BQ8NCS4 154 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 PCDH19Q8TAB3 1148 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 SGF29Q96ES7 293 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 MRFAP1L1Q96HT8 127 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 GFM1Q96RP9 751 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 EPAS1Q99814 870 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 FAM117AQ9C073 453 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 DNAI1Q9UI46 699 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 ACSL6Q9UKU0 697 aa16.64■□□□□ 0.25
SHKBP1-215ENST00000597649 NEU3Q9UQ49 428 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms