RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 C1orf131Q8NDD1 294 aaKnown RBP16.53■□□□□ 0.24
C19orf54-207ENST00000597507 OR2AP1Q8NGE2 309 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 CXorf40AQ8TE69 158 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 NKD1Q969G9 470 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
C19orf54-207ENST00000597507 TBCBQ99426 244 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 NDFIP2Q9NV92 336 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 RRN3Q9NYV6 651 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.24
C19orf54-207ENST00000597507 PCDHGC3Q9UN70 934 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 COQ6Q9Y2Z9 468 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 ZDHHC9Q9Y397 364 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 CACNA1DQ01668 2161 aa16.53■□□□□ 0.24
C19orf54-207ENST00000597507 TMEM110-MUSTN1A8MSY1 372 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.24
C19orf54-207ENST00000597507 TIMP2P16035 220 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 PNLIPP16233 465 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 USP8P40818 1118 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 ATXN7L2Q5T6C5 722 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-207ENST00000597507 HIST2H2BCQ6DN03 193 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 ISM2Q6H9L7 571 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 GDPD4Q6W3E5 623 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 LEKR1Q6ZMV7 388 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 SPATA20Q8TB22 786 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 ARHGEF2Q92974 986 aaKnown RBP16.52■□□□□ 0.24
C19orf54-207ENST00000597507 PMEPA1Q969W9 287 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 RBM15Q96T37 977 aaKnown RBP eCLIP16.52■□□□□ 0.243e-9■■■■■ 30.8
C19orf54-207ENST00000597507 APOOQ9BUR5 198 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 C1QTNF7Q9BXJ2 289 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 B3GNT4Q9C0J1 378 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 LRIT1Q9P2V4 623 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 OR1A2Q9Y585 309 aa16.52■□□□□ 0.24
C19orf54-207ENST00000597507 TEP1Q99973 2627 aaKnown RBP16.51■□□□□ 0.23
C19orf54-207ENST00000597507 BLACEA4D250 179 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 STMND1H3BQB6 276 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 B4GAT1O43505 415 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 GSRP00390 522 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 SNRPD1P62314 119 aaKnown RBP16.51■□□□□ 0.23
C19orf54-207ENST00000597507 B4GALNT1Q00973 533 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 INPP5AQ14642 412 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 NFATC4Q14934 902 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 NCAPHQ15003 741 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 LRRC14Q15048 493 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 ARHGAP44Q17R89 818 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 TMEM164Q5U3C3 297 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 TTI2Q6NXR4 508 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 FAM46DQ8NEK8 389 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 DHTKD1Q96HY7 919 aaPredicted RBP16.51■□□□□ 0.23
C19orf54-207ENST00000597507 OSBPL1AQ9BXW6 950 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 RDH14Q9HBH5 336 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 ZNF71Q9NQZ8 489 aaPredicted RBP16.51■□□□□ 0.23
C19orf54-207ENST00000597507 KLQ9UEF7 1012 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 TUBD1Q9UJT1 453 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 ANAPC2Q9UJX6 822 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 STAP1Q9ULZ2 295 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 PLAAQ9Y263 795 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 ITPR2Q14571 2701 aa16.51■□□□□ 0.23
C19orf54-207ENST00000597507 RP1L1Q8IWN7 2480 aaPredicted RBP16.5■□□□□ 0.23
C19orf54-207ENST00000597507 PSMA7O14818 248 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 F9P00740 461 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 TNFP01375 233 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 LIFP15018 202 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 HTR1BP28222 390 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 CCR10P46092 362 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 APBA1Q02410 837 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.23
C19orf54-207ENST00000597507 POLD3Q15054 466 aaPredicted RBP16.5■□□□□ 0.23
C19orf54-207ENST00000597507 EFHC2Q5JST6 749 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 ENOSF1Q7L5Y1 443 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 FMR1NBQ8N0W7 255 aaPredicted RBP16.5■□□□□ 0.23
C19orf54-207ENST00000597507 NETO2Q8NC67 525 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 PDXPQ96GD0 296 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 CCDC34Q96HJ3 373 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 HAPLN3Q96S86 360 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 PLCB1Q9NQ66 1216 aa16.5■□□□□ 0.23
C19orf54-207ENST00000597507 CXorf51AA0A1B0GTR3 108 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 FGF3P11487 239 aaPredicted RBP16.49■□□□□ 0.23
C19orf54-207ENST00000597507 ARHGEF7Q14155 803 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 SLC25A52Q3SY17 297 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 TMEM52BQ4KMG9 183 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 C14orf28Q4W4Y0 310 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 ACBD5Q5T8D3 534 aaPredicted RBP16.49■□□□□ 0.23
C19orf54-207ENST00000597507 TRNP1Q6NT89 227 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 TAF8Q7Z7C8 310 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 PIM3Q86V86 326 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 IRF2BP1Q8IU81 584 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 RCBTB1Q8NDN9 531 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 OR1E3Q8WZA6 343 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 FUBP1Q96AE4 644 aaKnown RBP16.49■□□□□ 0.23
C19orf54-207ENST00000597507 WDR92Q96MX6 357 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 CRACR2AQ9BSW2 395 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 PPARGC1AQ9UBK2 798 aaKnown RBP16.49■□□□□ 0.23
C19orf54-207ENST00000597507 PAXBP1Q9Y5B6 917 aa16.49■□□□□ 0.23
C19orf54-207ENST00000597507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
C19orf54-207ENST00000597507 DGKBQ9Y6T7 804 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms