RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ALKBH5Q6P6C2 394 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 POLNQ7Z5Q5 900 aa18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 FAM181AQ8N9Y4 354 aa18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 TP53I13Q8NBR0 393 aaPredicted RBP18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 TSEN2Q8NCE0 465 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 CINPQ9BW66 212 aaPredicted RBP18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 ATP13A3Q9H7F0 1226 aa18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 USP29Q9HBJ7 922 aa18.1■□□□□ 0.49
CHMP2A-203ENST00000597209 CFAP69A5D8W1 941 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 FAM149AA5PLN7 773 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 TPM3P06753 285 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 CKMT1AP12532 417 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 JUPP14923 745 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 TCF4P15884 667 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 ITIH2P19823 946 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 SERPINA4P29622 427 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 IGFALSP35858 605 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 RGRP47804 291 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 E2F1Q01094 437 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 LRRC73Q5JTD7 316 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 CCDC122Q5T0U0 273 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 ERAP2Q6P179 960 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 ARHGAP36Q6ZRI8 547 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 MARCH9Q86YJ5 346 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 BTN2A2Q8WVV5 523 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 ECHDC3Q96DC8 303 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 TBATAQ96M53 351 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 PSKH2Q96QS6 385 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 NUP85Q9BW27 656 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 PCDH12Q9NPG4 1184 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 ANAPC7Q9UJX3 599 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 NENFQ9UMX5 172 aa18.09■□□□□ 0.49
CHMP2A-203ENST00000597209 SPEGQ15772 3267 aa18.08■□□□□ 0.49
CHMP2A-203ENST00000597209 AMPD1P23109 780 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 CASP14P31944 242 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 HSPA9P38646 679 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 DAB2P98082 770 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 SLC25A11Q02978 314 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 BCL2L1Q07817 233 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 EIF2B5Q13144 721 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 LBRQ14739 615 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 NFKBIBQ15653 356 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 SMTNL2Q2TAL5 461 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 ZNF542PQ5EBM4 170 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 TPRG1LQ5T0D9 272 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 CFAP58Q5T655 872 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 TMCO3Q6UWJ1 677 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 CAMK1DQ8IU85 385 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 MDM1Q8TC05 714 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 FAM71BQ8TC56 605 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 HSPH1Q92598 858 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 CSPG4P5Q96PW8 444 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 XPO4Q9C0E2 1151 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 PCDH18Q9HCL0 1135 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 MBNL1Q9NR56 388 aaKnown RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 EVA1BQ9NVM1 165 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 RCOR3Q9P2K3 495 aaPredicted RBP18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 SEPT3Q9UH03 358 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 KLF15Q9UIH9 416 aa18.08■□□□□ 0.48
CHMP2A-203ENST00000597209 TMEM110-MUSTN1A8MSY1 372 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 K7ESM1 405 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 MYO1FO00160 1098 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 TRAFD1O14545 582 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 TPP1O14773 563 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 FFAR2O15552 330 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 JUNDP17535 347 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 MMP12P39900 470 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 PEX5P50542 639 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 DUSP3P51452 185 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 THOP1P52888 689 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 AP1S1P61966 158 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 POLR2LP62875 67 aaKnown RBP18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 LRRC14Q15048 493 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 HES3Q5TGS1 186 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 TXNRD3NBQ6F5E7 133 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 MACC1Q6ZN28 852 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 TP53INP2Q8IXH6 220 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 ZNF548Q8NEK5 533 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 SPOCK2Q92563 424 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 APOLD1Q96LR9 279 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 WRAP53Q9BUR4 548 aaKnown RBP18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 ETNK2Q9NVF9 386 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 SALL4Q9UJQ4 1053 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 ATP8A1Q9Y2Q0 1164 aa18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 TDRD6O60522 2096 aaKnown RBP18.07■□□□□ 0.48
CHMP2A-203ENST00000597209 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 A0A1W2PQ67 120 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 AQP9O43315 295 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 CBFA2T2O43439 604 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 PEX11BO96011 259 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 GP1BAP07359 652 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 C6P13671 934 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 SERPINB6P35237 376 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 EIF4A3P38919 411 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 INSM1Q01101 510 aaPredicted RBP18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 SLC10A7Q0GE19 358 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 TARDBPQ13148 414 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 TRIM14Q14142 442 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms