RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 HCAR2Q8TDS4 363 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 ATG4AQ8WYN0 398 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 RAB7BQ96AH8 199 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 MIR1-1HGQ9H1L0 117 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 SMOC1Q9H4F8 434 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 EIF2B4Q9UI10 523 aaKnown RBP23.09■■□□□ 1.29
PNKP-205ENST00000595081 PILRBQ9UKJ0 227 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 PCDHGA5Q9Y5G8 931 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 RAI2Q9Y5P3 530 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 SLCO1B1Q9Y6L6 691 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 TNRC6BQ9UPQ9 1833 aaKnown RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 ANKRD36A6QL64 1941 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 A0A1W2PQU0 124 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 UPK3BL1B0FP48 263 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 UPK3BL2E5RIL1 263 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 HTRA2O43464 458 aaPredicted RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 AP1G1O43747 822 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 RNGTTO60942 597 aaKnown RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 MMP2P08253 660 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 XPAP23025 273 aaPredicted RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 MSNP26038 577 aaKnown RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 CD86P42081 329 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 CCR5P51681 352 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 SEMG2Q02383 582 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 UGP2Q16851 508 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 WDR45BQ5MNZ6 344 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 SYT12Q8IV01 421 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 DNASE2BQ8WZ79 361 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 TEKT5Q96M29 485 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 EBF2Q9HAK2 575 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 PCDH12Q9NPG4 1184 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 KLHL8Q9P2G9 620 aaPredicted RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 PCDHB9Q9Y5E1 797 aa23.08■■□□□ 1.29
PNKP-205ENST00000595081 RIF1Q5UIP0 2472 aaKnown RBP23.08■■□□□ 1.29
PNKP-205ENST00000595081 NEMP1O14524 444 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 AREL1O15033 823 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 KCNN4O15554 427 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 CES1P23141 567 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 CD68P34810 354 aaPredicted RBP23.07■■□□□ 1.28
PNKP-205ENST00000595081 GNG11P61952 73 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 SKOR1P84550 965 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 SPEM2Q0P670 501 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 SEL1L3Q68CR1 1132 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 TRIM69Q86WT6 500 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 ZNF567Q8N184 647 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 SLC35B2Q8TB61 432 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 KLK6Q92876 244 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 RBM15Q96T37 977 aaKnown RBP eCLIP23.07■■□□□ 1.28
PNKP-205ENST00000595081 ORAI3Q9BRQ5 295 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 GLOD4Q9HC38 313 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 DNPEPQ9ULA0 475 aa23.07■■□□□ 1.28
PNKP-205ENST00000595081 ZFR2Q9UPR6 939 aaKnown RBP23.07■■□□□ 1.28
PNKP-205ENST00000595081 F5H423 210 aaPredicted RBP23.06■■□□□ 1.28
PNKP-205ENST00000595081 PGLSO95336 258 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 CPP00450 1065 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 FGGP02679 453 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 SERPINF2P08697 491 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 NEK5Q6P3R8 708 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 PRPF39Q86UA1 669 aaKnown RBP23.06■■□□□ 1.28
PNKP-205ENST00000595081 HORMAD1Q86X24 394 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 ZCCHC9Q8N567 271 aaKnown RBP23.06■■□□□ 1.28
PNKP-205ENST00000595081 C1orf54Q8WWF1 131 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 IMP4Q96G21 291 aaKnown RBP23.06■■□□□ 1.28
PNKP-205ENST00000595081 WDR24Q96S15 920 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 SLC25A51Q9H1U9 297 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 USP29Q9HBJ7 922 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 PARD6AQ9NPB6 346 aa23.06■■□□□ 1.28
PNKP-205ENST00000595081 PATE3B3GLJ2 98 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 LATO43561 262 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 TSPAN6O43657 245 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 PDHA1P08559 390 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 NFKB1P19838 968 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 CD27P26842 260 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 SIX1Q15475 284 aaPredicted RBP23.05■■□□□ 1.28
PNKP-205ENST00000595081 ZNF284Q2VY69 593 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 PLA2G2CQ5R387 149 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 ARMC12Q5T9G4 340 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 PEAR1Q5VY43 1037 aaPredicted RBP23.05■■□□□ 1.28
PNKP-205ENST00000595081 PID1Q7Z2X4 250 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 SPATA22Q8NHS9 363 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 VAT1Q99536 393 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 FERMT1Q9BQL6 677 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 WRAP53Q9BUR4 548 aaKnown RBP23.05■■□□□ 1.28
PNKP-205ENST00000595081 TDRD1Q9BXT4 1180 aaKnown RBP23.05■■□□□ 1.28
PNKP-205ENST00000595081 KCND1Q9NSA2 647 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 CHKBQ9Y259 395 aa23.05■■□□□ 1.28
PNKP-205ENST00000595081 A0A1W2PPC4 97 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 RIOK3O14730 519 aaKnown RBP23.04■■□□□ 1.28
PNKP-205ENST00000595081 LIASO43766 372 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 PRLRP16471 622 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 SUOXP51687 545 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 POLR2LP62875 67 aaKnown RBP23.04■■□□□ 1.28
PNKP-205ENST00000595081 FAM193AP78312 1265 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 LONRF2Q1L5Z9 754 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 TMEM259Q4ZIN3 620 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 TCEAL6Q6IPX3 200 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 ERAP2Q6P179 960 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 FAM71DQ8N9W8 422 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 C1orf216Q8TAB5 229 aa23.04■■□□□ 1.28
PNKP-205ENST00000595081 SPOCK2Q92563 424 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms