RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TNFAIP8O95379 198 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 HLA-DQB2P05538 268 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 RPL17P18621 184 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 CRHR1P34998 444 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 CPOXP36551 454 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 CREB5Q02930 508 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 KDSRQ06136 332 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 LRRC36Q1X8D7 754 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 PDCD4Q53EL6 469 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 ALFQ53S48 1182 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 CCDC80Q76M96 950 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 STRA8Q7Z7C7 330 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 ZNF354CQ86Y25 554 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 PYDC1Q8WXC3 89 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 C1orf74Q96LT6 269 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 IL22Q9GZX6 179 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 TLR8Q9NR97 1041 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 IPO11Q9UI26 975 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 TMED5Q9Y3A6 229 aa17.23■□□□□ 0.35
SHKBP1-205ENST00000594973 SLC12A8A0AV02 714 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 ADAM12O43184 909 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 PMPCBO75439 489 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 GMPRP36959 345 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 MTTPP55157 894 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 PRMT2P55345 433 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 PPM1JQ5JR12 505 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 RAP1GAP2Q684P5 730 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 C16orf46Q6P387 395 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 DHRS4L2Q6PKH6 230 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 TIFABQ6ZNK6 161 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 ERI1Q8IV48 349 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 CRIPAKQ8N1N5 446 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 SLC25A41Q8N5S1 370 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 SPPL2BQ8TCT7 592 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 C17orf50Q8WW18 174 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 MRPL9Q9BYD2 267 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 RNF208Q9H0X6 261 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 ATXN3LQ9H3M9 355 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 NOL6Q9H6R4 1146 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 CCSER2Q9H7U1 834 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 GLOD4Q9HC38 313 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 INIPQ9NRY2 104 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 C20orf96Q9NUD7 363 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 IL37Q9NZH6 218 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 RAB26Q9ULW5 256 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 AAR2Q9Y312 384 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 AK5Q9Y6K8 562 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 FAM92AA1XBS5 289 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 MAGEB3O15480 346 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 HOXA2O43364 376 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 NMBRP28336 390 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 SLC5A2P31639 672 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 GP5P40197 560 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 NPY2RP49146 381 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 NR1H2P55055 460 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 PDE1CQ14123 709 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 POU6F1Q14863 301 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 TRIP10Q15642 601 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 OGFRL1Q5TC84 451 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 PATL1Q86TB9 770 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 CIR1Q86X95 450 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 IL12RB2Q99665 862 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 TBL1YQ9BQ87 522 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 FICDQ9BVA6 458 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 MKS1Q9NXB0 559 aa17.22■□□□□ 0.35
SHKBP1-205ENST00000594973 SERPINA6P08185 405 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 AOC1P19801 751 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 TMPRSS15P98073 1019 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 NAB1Q13506 487 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 APOFQ13790 326 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 CCNIQ14094 377 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 TLR1Q15399 786 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 CHI3L2Q15782 390 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ANKS3Q6ZW76 656 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 CMC1Q7Z7K0 106 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 LINC00523Q86TU6 105 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 KCNMB4Q86W47 210 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 NUDCD3Q8IVD9 361 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 SLC26A7Q8TE54 656 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 IGSF8Q969P0 613 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 BIRC8Q96P09 236 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 FCRL5Q96RD9 977 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 CPNE1Q99829 537 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ZYG11BQ9C0D3 744 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 PLGRKTQ9HBL7 147 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 SPATA7Q9P0W8 599 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 SCN5AQ14524 2016 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 H7C4K7 107 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 TBC1D4O60343 1298 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ANXA9O76027 345 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 HAPLN1P10915 354 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 TYK2P29597 1187 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ALDH7A1P49419 539 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ERFP50548 548 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 NRG1Q02297 640 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 BTKQ06187 659 aa17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 ELAVL2Q12926 359 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-205ENST00000594973 TEDDM1Q5T9Z0 273 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms