RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NRF1Q16656 503 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 FAM83EQ2M2I3 478 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 ZNF792Q3KQV3 632 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 AGKQ53H12 422 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 C6orf10Q5SRN2 563 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 GJC2Q5T442 439 aaPredicted RBP13.35□□□□□ -0.27
VRK3-209ENST00000594948 INTS11Q5TA45 600 aaKnown RBP13.35□□□□□ -0.27
VRK3-209ENST00000594948 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 OLFML2BQ68BL8 750 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 DENND5AQ6IQ26 1287 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 HMBOX1Q6NT76 420 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 PAOXQ6QHF9 649 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 LPCAT2Q7L5N7 544 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 ERMP1Q7Z2K6 904 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 GALNT7Q86SF2 657 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TNIP2Q8NFZ5 429 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 HEXDCQ8WVB3 486 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 ELMO2Q96JJ3 720 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 RANBP9Q96S59 729 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TCF12Q99081 682 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 MED10Q9BTT4 135 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 COLEC11Q9BWP8 271 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TRIM15Q9C019 465 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 GLOD4Q9HC38 313 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TRPC7Q9HCX4 862 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 ACSS2Q9NR19 701 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 TREX1Q9NSU2 369 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
VRK3-209ENST00000594948 TBCCD1Q9NVR7 557 aa13.35□□□□□ -0.27
VRK3-209ENST00000594948 CHCHD3Q9NX63 227 aaKnown RBP13.35□□□□□ -0.27
VRK3-209ENST00000594948 A0A087WXM4 84 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 AQP12BA6NM10 295 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 YJEFN3A6XGL0 299 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 PFDN1O60925 122 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 GPC4O75487 556 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 IPO13O94829 963 aaKnown RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 CPB1P15086 417 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 ARNTP27540 789 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 ADRA1AP35348 466 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 SLC1A2P43004 574 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 CTBP1Q13363 440 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 MTX3Q5HYI7 312 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 NHSL2Q5HYW2 709 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 CUZD1Q86UP6 607 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 DENND6AQ8IWF6 608 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 AQP12AQ8IXF9 295 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 FIBCD1Q8N539 461 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 OR2T34Q8NGX1 318 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 OR2T3Q8NH03 318 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 TSPAN17Q96FV3 270 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 DUS2Q9NX74 493 aaKnown RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 FBXO5Q9UKT4 447 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 MAGED2Q9UNF1 606 aaPredicted RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 MTF2Q9Y483 593 aaPredicted RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 SNX13Q9Y5W8 968 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 NYNRINQ9P2P1 1898 aaKnown RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 SMIM35A0A1B0GVV1 85 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 A8MT66 165 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 LRIG2O94898 1065 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 LTA4HP09960 611 aaKnown RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 AKAP5P24588 427 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 SLC26A3P40879 764 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 ATXN3P54252 364 aaPredicted RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 MAP3K7CLP57077 242 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 RAB15P59190 212 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 SOX4Q06945 474 aaPredicted RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 ESRP1Q6NXG1 681 aaKnown RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 ZBTB49Q6ZSB9 765 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 OTOP3Q7RTS5 596 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 DHFR2Q86XF0 187 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 SCML4Q8N228 414 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 PCYOX1LQ8NBM8 494 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 CALML6Q8TD86 181 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 TFAP2CQ92754 450 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 SLC29A1Q99808 456 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 OMDQ99983 421 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 HOPXQ9BPY8 73 aaPredicted RBP13.34□□□□□ -0.27
VRK3-209ENST00000594948 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 WDCPQ9H6R7 721 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 CAAP1Q9H8G2 361 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 PLGRKTQ9HBL7 147 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 UBP1Q9NZI7 540 aa13.34□□□□□ -0.27
VRK3-209ENST00000594948 MMP3P08254 477 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 IMPDH2P12268 514 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 NCAM1P13591 858 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 MYF6P23409 242 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 NME5P56597 212 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 ESRRGP62508 458 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 ZNF460Q14592 562 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 ACAP2Q15057 778 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms