RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SLC12A2P55011 1212 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 CEP70Q8NHQ1 597 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 MRPL57Q9BQC6 102 aaKnown RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 FSD1LQ9BXM9 530 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 TNFRSF12AQ9NP84 129 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 FBXO5Q9UKT4 447 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 TLL2Q9Y6L7 1015 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 hCG_2014768A0A024R1R8 64 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 C17orf102A2RUQ5 167 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 TRPC5OSA6NMA1 111 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 MAFKO60675 156 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 TRMUO75648 421 aaKnown RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 THP07101 528 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 KCNA5P22460 613 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 PCSK7Q16549 785 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 ZNF789Q5FWF6 425 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 PTAR1Q7Z6K3 402 aaPredicted RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 C2CD4AQ8NCU7 369 aaPredicted RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 MAELQ96JY0 434 aaKnown RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 IL12RB2Q99665 862 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 SLC38A7Q9NVC3 462 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 RBM22Q9NW64 420 aaKnown RBP eCLIP16.63■□□□□ 0.25
LIG1-206ENST00000594067 CNOT11Q9UKZ1 510 aaKnown RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 RNF11Q9Y3C5 154 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 C7orf72A4D263 438 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 HDCP19113 662 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 ATP5F1P24539 256 aaPredicted RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 ADRA1AP35348 466 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 SCNN1GP51170 649 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 PLK1P53350 603 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 GEMP55040 296 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 SULT2A1Q06520 285 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 RFTN1Q14699 578 aaPredicted RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 TIGD5Q53EQ6 642 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 POTEHQ6S545 545 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 PIWIL4Q7Z3Z4 852 aaKnown RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 SCAMP5Q8TAC9 235 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 RTP3Q9BQQ7 232 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 IGSF5Q9NSI5 407 aa16.63■□□□□ 0.25
LIG1-206ENST00000594067 CHCHD3Q9NX63 227 aaKnown RBP16.63■□□□□ 0.25
LIG1-206ENST00000594067 HAS3O00219 553 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 TRIM38O00635 465 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 MATN3O15232 486 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 MSI1O43347 362 aaKnown RBP16.62■□□□□ 0.25
LIG1-206ENST00000594067 PFDN1O60925 122 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 CPB1P15086 417 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 DNAJB1P25685 340 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 EPHX2P34913 555 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 SCNN1BP51168 640 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PSME3P61289 254 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 ADRM1Q16186 407 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 MGAT5BQ3V5L5 792 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 CHERPQ8IWX8 916 aaKnown RBP16.62■□□□□ 0.25
LIG1-206ENST00000594067 STON2Q8WXE9 905 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 ATP6V1E2Q96A05 226 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 MRGPRX2Q96LB1 330 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 OLFM1Q99784 485 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PCDHAC1Q9H158 963 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 TRPC7Q9HCX4 862 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 TMLHEQ9NVH6 421 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 SFMBT1Q9UHJ3 866 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 A0A087X1B8 175 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PAGE1O75459 146 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 CCDC166P0CW27 439 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PSMC3P17980 439 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 POLD2P49005 469 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 ZNF33AQ06730 810 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PDAP1Q13442 181 aaKnown RBP16.62■□□□□ 0.25
LIG1-206ENST00000594067 PPP1R3AQ16821 1122 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 IL23RQ5VWK5 629 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 NEPROQ6NW34 567 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
LIG1-206ENST00000594067 NUP93Q8N1F7 819 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PELI3Q8N2H9 469 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 HMGCLL1Q8TB92 370 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 TREX1Q9NSU2 369 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 FAM105AQ9NUU6 356 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 ARHGEF38Q9NXL2 777 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 NUDT5Q9UKK9 219 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
LIG1-206ENST00000594067 E7ENX8 843 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 PCSK1P29120 753 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 NRF1Q16656 503 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 BTBD8Q5XKL5 378 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 LZICQ8WZA0 190 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 ENTPD7Q9NQZ7 604 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 FLRT1Q9NZU1 646 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 DNAH12Q6ZR08 3092 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 PAMP19021 973 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 POU4F1Q01851 419 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 TECRLQ5HYJ1 363 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 HASPINQ8TF76 798 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 PHF21BQ96EK2 531 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 TMEM209Q96SK2 561 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 SEMA6AQ9H2E6 1030 aa16.61■□□□□ 0.25
LIG1-206ENST00000594067 SCN4AP35499 1836 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms