RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MFHAS1Q9Y4C4 1052 aa13.37□□□□□ -0.27
H3F3B-213ENST00000593254 HS3ST3A1Q9Y663 406 aa13.37□□□□□ -0.27
H3F3B-213ENST00000593254 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
H3F3B-213ENST00000593254 AHCTF1Q8WYP5 2266 aa13.37□□□□□ -0.27
H3F3B-213ENST00000593254 DOPEY2Q9Y3R5 2298 aa13.37□□□□□ -0.27
H3F3B-213ENST00000593254 POM121BA6NF01 834 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 A6NNZ2 444 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 EEF2KO00418 725 aaKnown RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 AREL1O15033 823 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 RAD51BO15315 384 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PRPSAP2O60256 369 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 SDC3O75056 442 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 LRCH4O75427 683 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 DXOO77932 396 aaKnown RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 IGSF6O95976 241 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PAK4O96013 591 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 MYBL1P10243 752 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 MIPP30301 263 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 NDST2P52849 883 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 TPM4P67936 248 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 RAD51Q06609 339 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 LY6DQ14210 128 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PROX2Q3B8N5 592 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 GDPD4Q6W3E5 623 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 KYAT3Q6YP21 454 aaKnown RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PSTKQ8IV42 348 aaKnown RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 ASB12Q8WXK4 309 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 LENG8Q96PV6 779 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 KCTD15Q96SI1 283 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 CALN1Q9BXU9 219 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PDFQ9HBH1 243 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 LHX3Q9UBR4 397 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 GGT7Q9UJ14 662 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
H3F3B-213ENST00000593254 LRRK2Q5S007 2527 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 IGLON5A6NGN9 336 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 NEMP1O14524 444 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 PRAMEF11O60813 436 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 WISP1O95388 367 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 MT-CO3P00414 261 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 DGKAP23743 735 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 ZNF135P52742 658 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 UBASH3AP57075 661 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 E2F1Q01094 437 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 CYTH1Q15438 398 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 BROXQ5VW32 411 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 AFMIDQ63HM1 303 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 KDM7AQ6ZMT4 941 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 Q6ZSR6 202 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 RFX8Q6ZV50 586 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 PTAR1Q7Z6K3 402 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 DCP2Q8IU60 420 aaKnown RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 SLC25A45Q8N413 288 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 NAF1Q96HR8 494 aaKnown RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 CELF6Q96J87 481 aaKnown RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 SLC39A8Q9C0K1 460 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 MRPL47Q9HD33 250 aaKnown RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 DKK3Q9UBP4 350 aa13.35□□□□□ -0.27
H3F3B-213ENST00000593254 UBA2Q9UBT2 640 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
H3F3B-213ENST00000593254 SPTY2D1-AS1A0A0U1RR47 76 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 ARHGAP42A6NI28 874 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 J3KR12 359 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 INSIG1O15503 277 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 ERCC2P18074 760 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 PCK1P35558 622 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 HCAR3P49019 387 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 ZBED6P86452 979 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 SGCGQ13326 291 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
H3F3B-213ENST00000593254 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 TTC7BQ86TV6 843 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 IQCDQ96DY2 449 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 MED8Q96G25 268 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 UCKL1Q9NWZ5 548 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 MYO1AQ9UBC5 1043 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 CAPN11Q9UMQ6 739 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 RP1P56715 2156 aa13.34□□□□□ -0.27
H3F3B-213ENST00000593254 TSPAN11A1L157 253 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 GOLGA6L19H0YKK7 550 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 TRIM38O00635 465 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 FPGTO14772 594 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 DAPK3O43293 454 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 SIGLEC6O43699 453 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 PIAS2O75928 621 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 PIGNO95427 931 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms