RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 LRRC10BA6NIK2 292 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 LRRC53A6NM62 1247 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 DFFAO00273 331 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 LZTS3O60299 673 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-243ENST00000593128 GCATO75600 419 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 PCCBP05166 539 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 TGM2P21980 687 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 PAPOLAP51003 745 aaKnown RBP18.11■□□□□ 0.49
CIRBP-243ENST00000593128 PPARDQ03181 441 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 ELP6Q0PNE2 266 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 MAMLD1Q13495 774 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 LRRC14Q15048 493 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 CA9Q16790 459 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 CDCP2Q5VXM1 449 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 FOXR1Q6PIV2 292 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 MACC1Q6ZN28 852 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 IRF2BP2Q7Z5L9 587 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 HID1Q8IV36 788 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 TP53I13Q8NBR0 393 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-243ENST00000593128 SNIP1Q8TAD8 396 aaKnown RBP18.11■□□□□ 0.49
CIRBP-243ENST00000593128 FCRL3Q96P31 734 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-243ENST00000593128 LRRC61Q9BV99 259 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 SLC39A8Q9C0K1 460 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 SUV39H2Q9H5I1 410 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 LRRC19Q9H756 370 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 SP110Q9HB58 689 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 PCDH12Q9NPG4 1184 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 NCKIPSDQ9NZQ3 722 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 SIRPGQ9P1W8 387 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 MYO1AQ9UBC5 1043 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 DKK3Q9UBP4 350 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 GULP1Q9UBP9 304 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 PNMA8BQ9ULN7 279 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-243ENST00000593128 MFHAS1Q9Y4C4 1052 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 ANKRD36A6QL64 1941 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 SHROOM3Q8TF72 1996 aa18.11■□□□□ 0.49
CIRBP-243ENST00000593128 PALMO75781 387 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 RNF8O76064 485 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 C6P13671 934 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 CTSEP14091 401 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 RPIAP49247 311 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 NDST2P52849 883 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 YPEL5P62699 121 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 TMEM52BQ4KMG9 183 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 FILIP1LQ4L180 1135 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 C3orf38Q5JPI3 329 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 ENPP7Q6UWV6 458 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 CAMK1DQ8IU85 385 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 TSACCQ96A04 125 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-243ENST00000593128 KCTD15Q96SI1 283 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-243ENST00000593128 SNRNP25Q9BV90 132 aaKnown RBP18.1■□□□□ 0.49
CIRBP-243ENST00000593128 CINPQ9BW66 212 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-243ENST00000593128 CPEB1Q9BZB8 566 aaKnown RBP18.1■□□□□ 0.49
CIRBP-243ENST00000593128 HAUS4Q9H6D7 363 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 PDFQ9HBH1 243 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 SALL4Q9UJQ4 1053 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 OR1A2Q9Y585 309 aa18.1■□□□□ 0.49
CIRBP-243ENST00000593128 PRPSAP2O60256 369 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 PRAMEF11O60813 436 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 CELA2BP08218 269 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-243ENST00000593128 TSHRP16473 764 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 LIG3P49916 1009 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 CXADRP78310 365 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 UGP2Q16851 508 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 WSCD2Q2TBF2 565 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 PERM1Q5SV97 790 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 ERMARDQ5T6L9 678 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 PPP1R2P3Q6NXS1 205 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 SLC35F3Q8IY50 421 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 TSEN2Q8NCE0 465 aaKnown RBP18.09■□□□□ 0.49
CIRBP-243ENST00000593128 ZNF653Q96CK0 615 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 PEBP4Q96S96 227 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 TRIM7Q9C029 511 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 RTN4Q9NQC3 1192 aaKnown RBP18.09■□□□□ 0.49
CIRBP-243ENST00000593128 WDR70Q9NW82 654 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
CIRBP-243ENST00000593128 SATB2Q9UPW6 733 aa18.09■□□□□ 0.49
CIRBP-243ENST00000593128 BPTFQ12830 3046 aa18.08■□□□□ 0.49
CIRBP-243ENST00000593128 SMTNL1A8MU46 457 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 A8MX80 341 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 TPP1O14773 563 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 YY2O15391 372 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 BUB1BO60566 1050 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-243ENST00000593128 FTLP02792 175 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ERCC2P18074 760 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 HTR1BP28222 390 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 SERPINA4P29622 427 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 HTR7P34969 479 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 RGRP47804 291 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 PCBP4P57723 403 aaKnown RBP18.08■□□□□ 0.48
CIRBP-243ENST00000593128 INPP5AQ14642 412 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 GRM3Q14832 879 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 C6orf132Q5T0Z8 1188 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ESRP1Q6NXG1 681 aaKnown RBP18.08■□□□□ 0.48
CIRBP-243ENST00000593128 RBM44Q6ZP01 1051 aaKnown RBP18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ARHGAP36Q6ZRI8 547 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 RFX8Q6ZV50 586 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 SRLQ86TD4 932 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 SPACA3Q8IXA5 215 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms