RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 PTK2BQ14289 1009 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 PPP6R3Q5H9R7 873 aaPredicted RBP23.51■■□□□ 1.35
MBD3-211ENST00000592965 KDM7AQ6ZMT4 941 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 NPWQ8N729 165 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 WRAP53Q9BUR4 548 aaKnown RBP23.51■■□□□ 1.35
MBD3-211ENST00000592965 SUV39H2Q9H5I1 410 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 EVA1BQ9NVM1 165 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 U3KQA8 63 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 A0A1W2PQJ5 194 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 NEBLO76041 1014 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 GP1BAP07359 652 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 JUNDP17535 347 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 PBX1P40424 430 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 THOP1P52888 689 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 DPYSQ14117 519 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 RTP5Q14D33 572 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 ACAP1Q15027 740 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 UGP2Q16851 508 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 ZCCHC8Q6NZY4 707 aaKnown RBP23.5■■□□□ 1.35
MBD3-211ENST00000592965 BRAT1Q6PJG6 821 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 TP53I13Q8NBR0 393 aaPredicted RBP23.5■■□□□ 1.35
MBD3-211ENST00000592965 SYN2Q92777 582 aaPredicted RBP23.5■■□□□ 1.35
MBD3-211ENST00000592965 CBX8Q9HC52 389 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 LOC400499M0QZD8 3231 aa23.5■■□□□ 1.35
MBD3-211ENST00000592965 SYCE3A1L190 88 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 RIOK3O14730 519 aaKnown RBP23.49■■□□□ 1.35
MBD3-211ENST00000592965 AQP9O43315 295 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 PALMO75781 387 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 DUSP3P51452 185 aaPredicted RBP23.49■■□□□ 1.35
MBD3-211ENST00000592965 TPM4P67936 248 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 FANCCQ00597 558 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 RFTN1Q14699 578 aaPredicted RBP23.49■■□□□ 1.35
MBD3-211ENST00000592965 KLHL40Q2TBA0 621 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 HGSNATQ68CP4 663 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 C19orf48Q6RUI8 117 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 MACC1Q6ZN28 852 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 BTN2A2Q8WVV5 523 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 TBATAQ96M53 351 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 SP110Q9HB58 689 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 PCDH12Q9NPG4 1184 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 NCKIPSDQ9NZQ3 722 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 CWC15Q9P013 229 aaKnown RBP23.49■■□□□ 1.35
MBD3-211ENST00000592965 MYO1AQ9UBC5 1043 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 BZW2Q9Y6E2 419 aaKnown RBP23.49■■□□□ 1.35
MBD3-211ENST00000592965 RP1P56715 2156 aa23.49■■□□□ 1.35
MBD3-211ENST00000592965 A0A087WV48 116 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 BUB1BO60566 1050 aaPredicted RBP23.48■■□□□ 1.35
MBD3-211ENST00000592965 MMP12P39900 470 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 RGRP47804 291 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 IL10RBQ08334 325 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 IRF4Q15306 451 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 DPYSL2Q16555 572 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 TDRD12Q587J7 1177 aaKnown RBP23.48■■□□□ 1.35
MBD3-211ENST00000592965 CFAP58Q5T655 872 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 ERAP2Q6P179 960 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 SRLQ86TD4 932 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 LUZP1Q86V48 1076 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 CAMK1DQ8IU85 385 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 LZTR1Q8N653 840 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 TSEN2Q8NCE0 465 aaKnown RBP23.48■■□□□ 1.35
MBD3-211ENST00000592965 CINPQ9BW66 212 aaPredicted RBP23.48■■□□□ 1.35
MBD3-211ENST00000592965 ATP13A3Q9H7F0 1226 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 ZWILCHQ9H900 591 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 MBNL1Q9NR56 388 aaKnown RBP23.48■■□□□ 1.35
MBD3-211ENST00000592965 SPASTQ9UBP0 616 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 ATP8A1Q9Y2Q0 1164 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 LRP4O75096 1905 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 PTPRQQ9UMZ3 2332 aa23.48■■□□□ 1.35
MBD3-211ENST00000592965 H3BRJ5 948 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 DFFAO00273 331 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 TPP1O14773 563 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 OPA1O60313 960 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 MT-CO3P00414 261 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 C6P13671 934 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 SERPINA4P29622 427 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 NSUN2Q08J23 767 aaKnown RBP eCLIP23.47■■□□□ 1.35
MBD3-211ENST00000592965 AGERQ15109 404 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 COL28A1Q2UY09 1125 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 CDCP2Q5VXM1 449 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 ZSWIM9Q86XI8 627 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 PHACTR4Q8IZ21 702 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 LMX1AQ8TE12 382 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 APOBEC3BQ9UH17 382 aaKnown RBP23.47■■□□□ 1.35
MBD3-211ENST00000592965 SALL4Q9UJQ4 1053 aa23.47■■□□□ 1.35
MBD3-211ENST00000592965 MYF5P13349 255 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 IL1R2P27930 398 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 PEX5P50542 639 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 LRRC14Q15048 493 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 BOLA3Q53S33 107 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 ARHGAP36Q6ZRI8 547 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 RBFAQ8N0V3 343 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 ECHDC3Q96DC8 303 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 IQCDQ96DY2 449 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 ZNF599Q96NL3 588 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 PNMA8BQ9ULN7 279 aaPredicted RBP23.46■■□□□ 1.35
MBD3-211ENST00000592965 AK5Q9Y6K8 562 aa23.46■■□□□ 1.35
MBD3-211ENST00000592965 LMO7DNF2Z398 122 aa23.45■■□□□ 1.34
MBD3-211ENST00000592965 SERPING1P05155 500 aa23.45■■□□□ 1.34
MBD3-211ENST00000592965 EIF4A3P38919 411 aaKnown RBP23.45■■□□□ 1.34
MBD3-211ENST00000592965 LIG3P49916 1009 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms