RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 HEMGNQ9BXL5 484 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 NT5MQ9NPB1 228 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 DLL3Q9NYJ7 618 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 TPX2Q9ULW0 747 aaKnown RBP15.46■□□□□ 0.07
TRIM47-206ENST00000592942 GUCA1BQ9UMX6 200 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 PCDHGC4Q9Y5F7 938 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 TRPM6Q9BX84 2022 aa15.46■□□□□ 0.07
TRIM47-206ENST00000592942 A0A1B0GVT2 93 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 KCNK1O00180 336 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 TSPAN6O43657 245 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 JCHAINP01591 159 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 HLA-DQB2P05538 268 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 PTPN7P35236 360 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 GRIA4P48058 902 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 AFF3P51826 1226 aaKnown RBP15.45■□□□□ 0.06
TRIM47-206ENST00000592942 RWDD2BP57060 319 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 IFI35P80217 286 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-206ENST00000592942 BCL2L1Q07817 233 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 NIPAL4Q0D2K0 466 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 ZBTB17Q13105 803 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 PDK1Q15118 436 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 TMEM52BQ4KMG9 183 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 ODF2Q5BJF6 829 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 STPG1Q5TH74 334 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 BRAT1Q6PJG6 821 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 BBS12Q6ZW61 710 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 PEX26Q7Z412 305 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 SYCE1Q8N0S2 351 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 TMEM145Q8NBT3 493 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 OR2I1PQ8NGU4 316 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 NSMCE1Q8WV22 266 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 SEMA3CQ99985 751 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 EDEM2Q9BV94 578 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 C1QTNF2Q9BXJ5 285 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 TSGA10Q9BZW7 698 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 ATP13A3Q9H7F0 1226 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 AMACRQ9UHK6 382 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 CA5BQ9Y2D0 317 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 EFR3BQ9Y2G0 817 aa15.45■□□□□ 0.06
TRIM47-206ENST00000592942 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 IGLON5A6NGN9 336 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 C4orf47A7E2U8 309 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SLC30A4O14863 429 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SLC31A1O15431 190 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 KRT86O43790 486 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 PAK4O96013 591 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 PRKCGP05129 697 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 MMP2P08253 660 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 CCDC175P0C221 793 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 PRLRP16471 622 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 TGM2P21980 687 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SERPINA4P29622 427 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 NUDT1P36639 197 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 MAPK8P45983 427 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SUOXP51687 545 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 RPS21P63220 83 aaKnown RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SEMG2Q02383 582 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 DSC2Q02487 901 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 AP1B1Q10567 949 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 TRAF2Q12933 501 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 GRIK2Q13002 908 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 PRKD1Q15139 912 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 KIF19Q2TAC6 998 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 RALGPS1Q5JS13 557 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 CCDC50Q8IVM0 306 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 BBS5Q8N3I7 341 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 NETO1Q8TDF5 533 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SERAC1Q96JX3 654 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 ZNF830Q96NB3 372 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 KLF6Q99612 283 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SLC17A9Q9BYT1 436 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 OSBPL8Q9BZF1 889 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 BRD8Q9H0E9 1235 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 PCDH12Q9NPG4 1184 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 SCUBE2Q9NQ36 999 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 DMTF1Q9Y222 760 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 ANKRD6Q9Y2G4 727 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 ANKRD36A6QL64 1941 aa15.44■□□□□ 0.06
TRIM47-206ENST00000592942 MIF4GDA9UHW6 222 aaKnown RBP15.43■□□□□ 0.06
TRIM47-206ENST00000592942 UPK3BL1B0FP48 263 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 UPK3BL2E5RIL1 263 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 VILLO15195 856 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 RAD51BO15315 384 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 FZD6O60353 706 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 MMP20O60882 483 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 PRLP01236 227 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 SYPP08247 313 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 CD38P28907 300 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 ZNF211Q13398 564 aaPredicted RBP15.43■□□□□ 0.06
TRIM47-206ENST00000592942 SETMARQ53H47 684 aaPredicted RBP15.43■□□□□ 0.06
TRIM47-206ENST00000592942 NAPEPLDQ6IQ20 393 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 KIAA1161Q6NSJ0 714 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 CBARPQ8N350 705 aaPredicted RBP15.43■□□□□ 0.06
TRIM47-206ENST00000592942 PIH1D2Q8WWB5 315 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 ASB12Q8WXK4 309 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 P3H4Q92791 437 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 BMFQ96LC9 184 aa15.43■□□□□ 0.06
TRIM47-206ENST00000592942 CEP41Q9BYV8 373 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms