RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ATL2Q8NHH9 583 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 IFI44Q8TCB0 444 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 LMX1AQ8TE12 382 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 FGF11Q92914 225 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 NAT6Q93015 286 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 ZNF578Q96N58 590 aaPredicted RBP13.41□□□□□ -0.26
APOC1-209ENST00000592885 SNRNP25Q9BV90 132 aaKnown RBP13.41□□□□□ -0.26
APOC1-209ENST00000592885 BOCQ9BWV1 1114 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 SLC13A1Q9BZW2 595 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 ABCG4Q9H172 646 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 SUV39H2Q9H5I1 410 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 DHX35Q9H5Z1 703 aaKnown RBP13.41□□□□□ -0.26
APOC1-209ENST00000592885 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 KLF15Q9UIH9 416 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 COL27A1Q8IZC6 1860 aaPredicted RBP13.41□□□□□ -0.26
APOC1-209ENST00000592885 ATRXP46100 2492 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 ANKRD36A6QL64 1941 aa13.41□□□□□ -0.26
APOC1-209ENST00000592885 EME2A4GXA9 379 aaPredicted RBP13.4□□□□□ -0.26
APOC1-209ENST00000592885 TMEM191CA6NGB0 347 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 LMO7DNF2Z398 122 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 TEX33O43247 280 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 PRPSAP2O60256 369 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 TCEA3O75764 348 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 NEBLO76041 1014 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 PIGNO95427 931 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 MYBL1P10243 752 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 HTR1BP28222 390 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 SERPINA4P29622 427 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 MMP12P39900 470 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 HCAR3P49019 387 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 LRRC14Q15048 493 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 IRF4Q15306 451 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 KLHL40Q2TBA0 621 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 SOWAHCQ53LP3 525 aaPredicted RBP13.4□□□□□ -0.26
APOC1-209ENST00000592885 LRRC73Q5JTD7 316 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 C6orf132Q5T0Z8 1188 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 AFMIDQ63HM1 303 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 IGF2-ASQ6U949 168 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 RFX8Q6ZV50 586 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 MAPK15Q8TD08 544 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 EXOC2Q96KP1 924 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
APOC1-209ENST00000592885 WRAP53Q9BUR4 548 aaKnown RBP13.4□□□□□ -0.26
APOC1-209ENST00000592885 LRRC61Q9BV99 259 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 HAUS4Q9H6D7 363 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 ATP13A3Q9H7F0 1226 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
APOC1-209ENST00000592885 ATP8A1Q9Y2Q0 1164 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 CELSR3Q9NYQ7 3312 aa13.4□□□□□ -0.26
APOC1-209ENST00000592885 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 INSIG1O15503 277 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 DAPK3O43293 454 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 CSO75390 466 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 ANXA6P08133 673 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 ALPIP09923 528 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 C6P13671 934 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 EIF4A3P38919 411 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 LSSP48449 732 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 PCBP4P57723 403 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 ERVPABLB-1P60509 514 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 PPARDQ03181 441 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 IL10RBQ08334 325 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 NSUN2Q08J23 767 aaKnown RBP eCLIP13.39□□□□□ -0.27
APOC1-209ENST00000592885 MTM1Q13496 603 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 COL9A2Q14055 689 aaPredicted RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 ACAP1Q15027 740 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 DEFB133Q30KQ1 61 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 FIGNQ5HY92 759 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 TMCO4Q5TGY1 634 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 LVRNQ6Q4G3 990 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 EFL1Q7Z2Z2 1120 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 RBFAQ8N0V3 343 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 LZTR1Q8N653 840 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 CELF6Q96J87 481 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 CINPQ9BW66 212 aaPredicted RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 SLC39A8Q9C0K1 460 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 SP110Q9HB58 689 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 PCDH12Q9NPG4 1184 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 MBNL1Q9NR56 388 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 GPATCH2LQ9NWQ4 482 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 TMEM63CQ9P1W3 806 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
APOC1-209ENST00000592885 PCDHB1Q9Y5F3 818 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 IGSF10Q6WRI0 2623 aa13.39□□□□□ -0.27
APOC1-209ENST00000592885 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 J3KR12 359 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 LRCH4O75427 683 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 PALMO75781 387 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 RASGRP1O95267 797 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 ERCC2P18074 760 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 MIPP30301 263 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 PCK1P35558 622 aa13.38□□□□□ -0.27
APOC1-209ENST00000592885 PAPOLAP51003 745 aaKnown RBP13.38□□□□□ -0.27
APOC1-209ENST00000592885 RENBPP51606 427 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms