RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	ATXN1L	P0C7T5	689 aa	Known RBP	11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	SERPINA4	P29622	427 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	ACSL1	P33121	698 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	CHRNA4	P43681	627 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	VPS41	P49754	854 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	SEMG2	Q02383	582 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	LMNB2	Q03252	620 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	RAD51	Q06609	339 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	CKAP4	Q07065	602 aa	Known RBP	11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	SRSF5	Q13243	272 aa	Known RBP	11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	SEMA5A	Q13591	1074 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	PTK6	Q13882	451 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	SPARCL1	Q14515	664 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	GRM3	Q14832	879 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	ANGPT1	Q15389	498 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	PCSK7	Q16549	785 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	QPCT	Q16769	361 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	SYCP2L	Q5T4T6	812 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	RANBP10	Q6VN20	620 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	USP30	Q70CQ3	517 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	ERN2	Q76MJ5	926 aa	Known RBP	11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	KDELC2	Q7Z4H8	507 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	FAM124A	Q86V42	546 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	JAML	Q86YT9	394 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	PGBD3	Q8N328	593 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	CCDC89	Q8N998	374 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	HCAR2	Q8TDS4	363 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	FERMT1	Q9BQL6	677 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	CARD6	Q9BX69	1037 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	RAB6B	Q9NRW1	208 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	FBXL12	Q9NXK8	326 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	PAK5	Q9P286	719 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	CYP8B1	Q9UNU6	501 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	ITM2B	Q9Y287	266 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	PPIL1	Q9Y3C6	166 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	PCDHB9	Q9Y5E1	797 aa		11.42	□□□□□ -0.58
CIRBP-236	ENST00000592051	ZNF318	Q5VUA4	2279 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	CCDC163	A0A0D9SF12	145 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	TP73	O15350	636 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	HR	O43593	1189 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	USP12	O75317	370 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	RNASEH2A	O75792	299 aa	Known RBP	11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	ANXA9	O76027	345 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	ADRB3	P13945	408 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	BCKDHB	P21953	392 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	GRIA1	P42261	906 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	MAGEA6	P43360	314 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	GEM	P55040	296 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	DR1	Q01658	176 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	CDK18	Q07002	472 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	GPS1	Q13098	491 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	MPP3	Q13368	585 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	MSLN	Q13421	630 aa	Predicted RBP	11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	GALNT3	Q14435	633 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	CDKN3	Q16667	212 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	UGP2	Q16851	508 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	ARMC12	Q5T9G4	340 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	ANKRD22	Q5VYY1	191 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	LONP2	Q86WA8	852 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	MMGT1	Q8N4V1	131 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	PDCD7	Q8N8D1	485 aa	Known RBP	11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	PRSS33	Q8NF86	280 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	IPMK	Q8NFU5	416 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	CPT1B	Q92523	772 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	FEM1C	Q96JP0	617 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	APOL2	Q9BQE5	337 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	FICD	Q9BVA6	458 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	PCDH12	Q9NPG4	1184 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	VPS45	Q9NRW7	570 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	WSB2	Q9NYS7	404 aa	Predicted RBP	11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	SCML1	Q9UN30	329 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	SPO11	Q9Y5K1	396 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	FADS3	Q9Y5Q0	445 aa		11.41	□□□□□ -0.58
CIRBP-236	ENST00000592051	UPK3BL1	B0FP48	263 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	UPK3BL2	E5RIL1	263 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	RIOK3	O14730	519 aa	Known RBP	11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	TMEM63A	O94886	807 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	SUN1	O94901	812 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	AP2A1	O95782	977 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	NDST3	O95803	873 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	CP	P00450	1065 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	EPO	P01588	193 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	ALPI	P09923	528 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	CTPS1	P17812	591 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	FDFT1	P37268	417 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	NEK3	P51956	506 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	NUBP1	P53384	320 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	ADPRH	P54922	357 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	RALGDS	Q12967	914 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	DHX34	Q14147	1143 aa	Known RBP	11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	KCNJ11	Q14654	390 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	TRADD	Q15628	312 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	ZNF528	Q3MIS6	628 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	SIRPB2	Q5JXA9	342 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	BRAT1	Q6PJG6	821 aa		11.4	□□□□□ -0.58
CIRBP-236	ENST00000592051	ZNF534	Q76KX8	674 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms