RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 KRCC1Q9NPI7 259 aaPredicted RBP3.66□□□□□ -1.82
VMP1-212ENST00000591782 RRAGDQ9NQL2 400 aaPredicted RBP3.66□□□□□ -1.82
VMP1-212ENST00000591782 ENTPD7Q9NQZ7 604 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 SPATS2LQ9NUQ6 558 aaKnown RBP3.66□□□□□ -1.82
VMP1-212ENST00000591782 COMMD8Q9NX08 183 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 C9orf78Q9NZ63 289 aaPredicted RBP3.66□□□□□ -1.82
VMP1-212ENST00000591782 IFT80Q9P2H3 777 aaPredicted RBP3.66□□□□□ -1.82
VMP1-212ENST00000591782 POLG2Q9UHN1 485 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 GTF2A1LQ9UNN4 478 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 CLDN16Q9Y5I7 305 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 RIMBP3CA6NJZ7 1639 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 RIMBP3BA6NNM3 1639 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 RIMBP3Q9UFD9 1639 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 KAT6BQ8WYB5 2073 aa3.66□□□□□ -1.82
VMP1-212ENST00000591782 BECN2A8MW95 431 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 I6L893 689 aaPredicted RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 SLC25A17O43808 307 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 CEP104O60308 925 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 AGR2O95994 175 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 IFIT1P09914 478 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 MYZAPP0CAP1 466 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 TRIM21P19474 475 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 NF2P35240 595 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 AVPR1AP37288 418 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 TUBP50607 506 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 MNAT1P51948 309 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 ARSFP54793 590 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 TPD52P55327 224 aaPredicted RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 VAMP2P63027 116 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 GPR18Q14330 331 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 SMC1AQ14683 1233 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 WTAPQ15007 396 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 ALDH1L2Q3SY69 923 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 FAM133BQ5BKY9 247 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 DCAF12L2Q5VW00 463 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 DAB2IPQ5VWQ8 1189 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 HEPHL1Q6MZM0 1159 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 SAMD14Q8IZD0 417 aaPredicted RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 PELI3Q8N2H9 469 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 ESX1Q8N693 406 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 MIGA1Q8NAN2 632 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 BICD2Q8TD16 824 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 DNAAF4Q8WXU2 420 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 USP6NLQ92738 828 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 FRAT1Q92837 279 aaPredicted RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 HVCN1Q96D96 273 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 TBC1D31Q96DN5 1066 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 ZBTB10Q96DT7 871 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 URB1-AS1Q96HZ7 61 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 NEK1Q96PY6 1258 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 EIF2AK1Q9BQI3 630 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 MMTAG2Q9BU76 263 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 LRRCC1Q9C099 1032 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 LHPPQ9H008 270 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 RBM38Q9H0Z9 239 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 PLAC1Q9HBJ0 212 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 TRPV5Q9NQA5 729 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 IRAK4Q9NWZ3 460 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 QPCTLQ9NXS2 382 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 PDP2Q9P2J9 529 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 CNOT7Q9UIV1 285 aaKnown RBP3.65□□□□□ -1.83
VMP1-212ENST00000591782 ITM2BQ9Y287 266 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 CRYL1Q9Y2S2 319 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 INSL5Q9Y5Q6 135 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 ZBED9Q6R2W3 1325 aa3.65□□□□□ -1.83
VMP1-212ENST00000591782 TRIP12Q14669 1992 aaPredicted RBP3.64□□□□□ -1.83
VMP1-212ENST00000591782 A0A096LPK6 155 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 C17orf113A0A1B0GUU1 675 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 RPS10-NUDT3A0A1W2PQS6 291 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 GTPBP10A4D1E9 387 aaKnown RBP3.64□□□□□ -1.83
VMP1-212ENST00000591782 FAM90A10PA6NDY2 464 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 GOLGA6L10A6NI86 522 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 H0YC42 278 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 GUCY1B2O75343 617 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 SMC2O95347 1197 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 NTN1O95631 604 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 CYP1A2P05177 515 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 MMP3P08254 477 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 ARSBP15848 533 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 GGT5P36269 586 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 MAP2K2P36507 400 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 GPD2P43304 727 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 RFX5P48382 616 aaPredicted RBP3.64□□□□□ -1.83
VMP1-212ENST00000591782 POLGP54098 1239 aaPredicted RBP3.64□□□□□ -1.83
VMP1-212ENST00000591782 CDH12P55289 794 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 SLC18A2Q05940 514 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 MAPK7Q13164 816 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 PDE1CQ14123 709 aaPredicted RBP3.64□□□□□ -1.83
VMP1-212ENST00000591782 BECN1Q14457 450 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 ZNF667Q5HYK9 610 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 FAAH2Q6GMR7 532 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 ZNF549Q6P9A3 640 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 LVRNQ6Q4G3 990 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 SLC22A25Q6T423 547 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 C17orf99Q6UX52 265 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 IL20RBQ6UXL0 311 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 Q6ZSV7 163 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 MOB3CQ70IA8 216 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 PRSS45Q7RTY3 260 aa3.64□□□□□ -1.83
VMP1-212ENST00000591782 CHD1LQ86WJ1 897 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms