RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 RUNX3Q13761 415 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 FRG1Q14331 258 aaKnown RBP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 SMAD1Q15797 465 aaKnown RBP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 C22orf39Q6P5X5 142 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 LRRC6Q86X45 466 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 CTAGE3PQ8IX95 158 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 PPM1NQ8N819 430 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 PPHLN1Q8NEY8 458 aaKnown RBP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 OR2AP1Q8NGE2 309 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 TTC8Q8TAM2 541 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 PTCD2Q8WV60 388 aaKnown RBP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 CERS2Q96G23 380 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 NECTIN4Q96NY8 510 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 RANBP9Q96S59 729 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 UGT1A7Q9HAW7 530 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 UGT1A10Q9HAW8 530 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 UGT1A8Q9HAW9 530 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 MRM3Q9HC36 420 aaKnown RBP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 GTSE1Q9NYZ3 720 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 SLC17A6Q9P2U8 582 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 PSMC3IPQ9P2W1 217 aaPredicted RBP11.48□□□□□ -0.57
TUBD1-211ENST00000591548 SLC2A6Q9UGQ3 507 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 CD207Q9UJ71 328 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 ERVW-1Q9UQF0 538 aa11.48□□□□□ -0.57
TUBD1-211ENST00000591548 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 MROH6A6NGR9 719 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 LDB2O43679 373 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 ECI2O75521 394 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 FAM155BO75949 473 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 PRKCGP05129 697 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 PIRTP0C851 137 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 BMP1P13497 986 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 ALADP13716 330 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 CBX1P83916 185 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 MGAT5Q09328 741 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 SEPT6Q14141 434 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 TMED2Q15363 201 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 DLG2Q15700 870 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 PTPRNQ16849 979 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 ACCSLQ4AC99 568 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 ARMC3Q5W041 872 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 NAIF1Q69YI7 327 aaPredicted RBP11.47□□□□□ -0.57
TUBD1-211ENST00000591548 ESRP1Q6NXG1 681 aaKnown RBP11.47□□□□□ -0.57
TUBD1-211ENST00000591548 EXOC3L1Q86VI1 746 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 SLC26A11Q86WA9 606 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 PHTF2Q8N3S3 785 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 CPA6Q8N4T0 437 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 CYB5D2Q8WUJ1 264 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 CHFRQ96EP1 664 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 MYO19Q96H55 970 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 SMIM14Q96QK8 99 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
TUBD1-211ENST00000591548 CEP44Q9C0F1 390 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 PPANQ9NQ55 473 aaKnown RBP11.47□□□□□ -0.57
TUBD1-211ENST00000591548 TREX1Q9NSU2 369 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 DEC1Q9P2X7 70 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
TUBD1-211ENST00000591548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 ANKRD66B4E2M5 251 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 PRRT4C9JH25 899 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 ARNTLO00327 626 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 TRAFD1O14545 582 aaPredicted RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 PIGNO95427 931 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 IGSF6O95976 241 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 GSRP00390 522 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 INHBAP08476 426 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 DLDP09622 509 aaKnown RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 SP100P23497 879 aaPredicted RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 ARNTP27540 789 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 GDI1P31150 447 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 SLC8A1P32418 973 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 HPDP32754 393 aaPredicted RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 GJA4P35212 333 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 OPRD1P41143 372 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 SNRPD1P62314 119 aaKnown RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 NR1H3Q13133 447 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 CNGA3Q16281 694 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 MYLK3Q32MK0 819 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 CARD16Q5EG05 197 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 GRAMD4Q6IC98 578 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 ZNF449Q6P9G9 518 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 Q6ZVU0 165 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 MARK2Q7KZI7 788 aaKnown RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 SFTPA1Q8IWL2 248 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 PCDH20Q8N6Y1 951 aaKnown RBP11.46□□□□□ -0.57
TUBD1-211ENST00000591548 LPCAT1Q8NF37 534 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 BRSK1Q8TDC3 778 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 BLOC1S5Q8TDH9 187 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 WFIKKN2Q8TEU8 576 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 FRS2Q8WU20 508 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 MZB1Q8WU39 189 aa11.46□□□□□ -0.57
TUBD1-211ENST00000591548 PDCD6IPQ8WUM4 868 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms