RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-208	ENST00000590301	ZNF599	Q96NL3	588 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	MAGEB5	Q9BZ81	275 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	SLC13A1	Q9BZW2	595 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	SUV39H2	Q9H5I1	410 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	DHX35	Q9H5Z1	703 aa	Known RBP	7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	HAUS4	Q9H6D7	363 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	ATP13A3	Q9H7F0	1226 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	ZWILCH	Q9H900	591 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	TAS2R14	Q9NYV8	317 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	SPAST	Q9UBP0	616 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	LHX3	Q9UBR4	397 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	CNOT8	Q9UFF9	292 aa	Known RBP	7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	ITM2B	Q9Y287	266 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	ACTL7A	Q9Y615	435 aa		7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	COL5A1	P20908	1838 aa	Predicted RBP	7.68	□□□□□ -1.18
NPC1-208	ENST00000590301	TMCO5B	A8MYB1	307 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	LMO7DN	F2Z398	122 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301		H3BRJ5	948 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	DDX3X	O00571	662 aa	Known RBP eCLIP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	RRP8	O43159	456 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	LZTS3	O60299	673 aa	Predicted RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	OPA1	O60313	960 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	MMP20	O60882	483 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	LRCH4	O75427	683 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	MT-CO3	P00414	261 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	JUND	P17535	347 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ERCC2	P18074	760 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	PTMS	P20962	102 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	NFKBIA	P25963	317 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	HTR1B	P28222	390 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	MIP	P30301	263 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ACTN2	P35609	894 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	HSPA9	P38646	679 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	MMP12	P39900	470 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	PAPOLA	P51003	745 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	AP1S1	P61966	158 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	IL10RB	Q08334	325 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	PIGH	Q14442	188 aa	Predicted RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	NR1I3	Q14994	352 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	LRRC14	Q15048	493 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	IQCB1	Q15051	598 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	UGP2	Q16851	508 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	CDCP2	Q5VXM1	449 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	CAVIN1	Q6NZI2	390 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	LVRN	Q6Q4G3	990 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	LSMEM2	Q8N112	164 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	SNIP1	Q8TAD8	396 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	SCG3	Q8WXD2	468 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	NAT6	Q93015	286 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	MARVELD3	Q96A59	401 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ZNF653	Q96CK0	615 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	APOLD1	Q96LR9	279 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	DEPDC7	Q96QD5	511 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	PSKH2	Q96QS6	385 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	IL12RB2	Q99665	862 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	SNRNP25	Q9BV90	132 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	CINP	Q9BW66	212 aa	Predicted RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	KLC2	Q9H0B6	622 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ABCG4	Q9H172	646 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ISCU	Q9H1K1	167 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	SP110	Q9HB58	689 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	KCTD5	Q9NXV2	234 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	SEPT3	Q9UH03	358 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	APOBEC3B	Q9UH17	382 aa	Known RBP	7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	PCSK1N	Q9UHG2	260 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ATP8A1	Q9Y2Q0	1164 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	AK5	Q9Y6K8	562 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	PCNX2	A6NKB5	2137 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	ATRX	P46100	2492 aa		7.67	□□□□□ -1.18
NPC1-208	ENST00000590301	IGSF10	Q6WRI0	2623 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	NBEA	Q8NFP9	2946 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	PI4KA	P42356	2102 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.66	□□□□□ -1.18
NPC1-208	ENST00000590301		J3KR12	359 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	SOCS5	O75159	536 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	PALM	O75781	387 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	ANXA6	P08133	673 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	ALPI	P09923	528 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	C6	P13671	934 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	KEL	P23276	732 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	SERPINB6	P35237	376 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	IGFALS	P35858	605 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	EIF4A3	P38919	411 aa	Known RBP	7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	ARL4A	P40617	200 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	ABCG1	P45844	678 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	PPARD	Q03181	441 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	BCL2L1	Q07817	233 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	EIF2B5	Q13144	721 aa	Known RBP	7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	MTM1	Q13496	603 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	DPYS	Q14117	519 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	ELOC	Q15369	112 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	NR0B2	Q15466	257 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	DPYSL2	Q16555	572 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	KLHL40	Q2TBA0	621 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	TDRD12	Q587J7	1177 aa	Known RBP	7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	ZNF542P	Q5EBM4	170 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	PPP6R3	Q5H9R7	873 aa	Predicted RBP	7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	RALGPS1	Q5JS13	557 aa		7.66	□□□□□ -1.18
NPC1-208	ENST00000590301	E4F1	Q66K89	784 aa	Predicted RBP	7.66	□□□□□ -1.18

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