RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CYLC1P35663 651 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-212ENST00000590260 SLC1A1P43005 524 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 SCNN1BP51168 640 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 RALGDSQ12967 914 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 BNIP3Q12983 259 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 STAT4Q14765 748 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 TAZQ16635 292 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 SLC9A4Q6AI14 798 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 NPNTQ6UXI9 565 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 GATAD2AQ86YP4 633 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 SPC24Q8NBT2 197 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 SAP25Q8TEE9 199 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 TSGA13Q96PP4 275 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 LENG8Q96PV6 779 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-212ENST00000590260 NOD2Q9HC29 1040 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 COQ6Q9Y2Z9 468 aa18.39■□□□□ 0.53
DDX39A-212ENST00000590260 SPTBN2O15020 2390 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 A0A0A6YYK5 440 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 RIOK3O14730 519 aaKnown RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 HTRA2O43464 458 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 PCDHGA12O60330 932 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 KRT1P04264 644 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 THEGLP0DJG4 465 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 MMP12P39900 470 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 MMP13P45452 471 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 CCT8P50990 548 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 AP1S1P61966 158 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 ADCY2Q08462 1091 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 TRAF2Q12933 501 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 GRM3Q14832 879 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 PTPRRQ15256 657 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 MAP7D3Q8IWC1 876 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 RHOT1Q8IXI2 618 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 TP53I13Q8NBR0 393 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 TPCN2Q8NHX9 752 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 ASB12Q8WXK4 309 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 RNF25Q96BH1 459 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 CENPTQ96BT3 561 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 NUDCD1Q96RS6 583 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 WRAP53Q9BUR4 548 aaKnown RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 ERVMER34-1Q9H9K5 563 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 GDF3Q9NR23 364 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 MBNL1Q9NR56 388 aaKnown RBP18.38■□□□□ 0.53
DDX39A-212ENST00000590260 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 HS3ST3A1Q9Y663 406 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 KNL1Q8NG31 2342 aa18.38■□□□□ 0.53
DDX39A-212ENST00000590260 CNOT1A5YKK6 2376 aaKnown RBP18.37■□□□□ 0.53
DDX39A-212ENST00000590260 MATN3O15232 486 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 TNNT1P13805 278 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 EPHA8P29322 1005 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-212ENST00000590260 SERPINA4P29622 427 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 AKT2P31751 481 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 IGFALSP35858 605 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 NOP2P46087 812 aaKnown RBP18.37■□□□□ 0.53
DDX39A-212ENST00000590260 RXRGP48443 463 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 BCL2L1Q07817 233 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 ZNF235Q14590 738 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 MARC1Q5VT66 337 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 ALG1LQ6GMV1 187 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 BRAT1Q6PJG6 821 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 VSIG1Q86XK7 387 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 SPOCK2Q92563 424 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 KRT35Q92764 455 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 KLHDC7BQ96G42 594 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 OLFM3Q96PB7 478 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 ATP13A3Q9H7F0 1226 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 NT5MQ9NPB1 228 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 TOR4AQ9NXH8 423 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 PNMA8BQ9ULN7 279 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-212ENST00000590260 PCNX2A6NKB5 2137 aa18.37■□□□□ 0.53
DDX39A-212ENST00000590260 NEMP1O14524 444 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 PJA2O43164 708 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 COL5A1P20908 1838 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-212ENST00000590260 CCNCP24863 283 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 HSPA9P38646 679 aaKnown RBP18.36■□□□□ 0.53
DDX39A-212ENST00000590260 CDKN2BP42772 138 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 RENBPP51606 427 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 PFN3P60673 137 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 OVGP1Q12889 678 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 HNRNPDQ14103 355 aaKnown RBP18.36■□□□□ 0.53
DDX39A-212ENST00000590260 SPA17Q15506 151 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 IFI16Q16666 785 aaKnown RBP18.36■□□□□ 0.53
DDX39A-212ENST00000590260 SLC45A4Q5BKX6 768 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 C11orf63Q6NUN7 778 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 KYAT3Q6YP21 454 aaKnown RBP18.36■□□□□ 0.53
DDX39A-212ENST00000590260 Q6ZSR6 202 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 NYAP1Q6ZVC0 841 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 LRRC49Q8IUZ0 686 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 ARRDC2Q8TBH0 407 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 FATE1Q969F0 183 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 HDAC11Q96DB2 347 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 SMIM14Q96QK8 99 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 LGMNQ99538 433 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 BAG1Q99933 345 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-212ENST00000590260 HERPUD2Q9BSE4 406 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 SLC32A1Q9H598 525 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 ATP8A1Q9Y2Q0 1164 aa18.36■□□□□ 0.53
DDX39A-212ENST00000590260 A6NNZ2 444 aa18.35■□□□□ 0.53
DDX39A-212ENST00000590260 FLRT2O43155 660 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms