RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CABIN1Q9Y6J0 2220 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 TSPAN11A1L157 253 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 C1QTNF9BB2RNN3 333 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 TNFSF14O43557 240 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 TRIM16O95361 564 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 LDOC1O95751 146 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-227ENST00000590188 PEX11BO96011 259 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 C1QTNF9P0C862 333 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 IGFALSP35858 605 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 CSNK1DP48730 415 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 ELP6Q0PNE2 266 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 DNAJC3Q13217 504 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 PDE1CQ14123 709 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-227ENST00000590188 UGP2Q16851 508 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 ANKRD20A8PQ5CZ79 823 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 TPRG1LQ5T0D9 272 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 RAB44Q7Z6P3 723 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-227ENST00000590188 FAM71BQ8TC56 605 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 NSMCE1Q8WV22 266 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 RAPGEF5Q92565 580 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 ZNF641Q96N77 438 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-227ENST00000590188 ZNF599Q96NL3 588 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 PSKH2Q96QS6 385 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 MBNL1Q9NR56 388 aaKnown RBP18.18■□□□□ 0.5
CIRBP-227ENST00000590188 UCKL1Q9NWZ5 548 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 DNAJC28Q9NX36 388 aa18.18■□□□□ 0.5
CIRBP-227ENST00000590188 RCOR3Q9P2K3 495 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-227ENST00000590188 A8MX80 341 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 FFAR2O15552 330 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 KRT7P08729 469 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 MAN1A1P33908 653 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 RENBPP51606 427 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ZNF75DP51815 510 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 TMEM52BQ4KMG9 183 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ERAP2Q6P179 960 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 BRAT1Q6PJG6 821 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ZSCAN30Q86W11 494 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 GAS2L3Q86XJ1 694 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 MARCH9Q86YJ5 346 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 RHOT2Q8IXI1 618 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.17■□□□□ 0.5
CIRBP-227ENST00000590188 PDCD6IPQ8WUM4 868 aaKnown RBP18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ADAMTS14Q8WXS8 1223 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 RFFLQ8WZ73 363 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 LENG8Q96PV6 779 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ZNF670Q9BS34 389 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 NT5MQ9NPB1 228 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 SCUBE2Q9NQ36 999 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 TFR2Q9UP52 801 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 ATP8A1Q9Y2Q0 1164 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 PCDHGC4Q9Y5F7 938 aa18.17■□□□□ 0.5
CIRBP-227ENST00000590188 LRRD1A4D1F6 860 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 ENC1O14682 589 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
CIRBP-227ENST00000590188 C6P13671 934 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 KDELR1P24390 212 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 MMP13P45452 471 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 RABIFP47224 123 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 AP1S1P61966 158 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 ITKQ08881 620 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 NSUN2Q08J23 767 aaKnown RBP eCLIP18.16■□□□□ 0.5
CIRBP-227ENST00000590188 FZD2Q14332 565 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 PDK2Q15119 407 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 IRF4Q15306 451 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 MARC1Q5VT66 337 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 KANSL1Q7Z3B3 1105 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 MAP7D3Q8IWC1 876 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 BBS5Q8N3I7 341 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 PQLC3Q8N755 202 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 TP53I13Q8NBR0 393 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-227ENST00000590188 DENND6BQ8NEG7 585 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 HCAR2Q8TDS4 363 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 CENPTQ96BT3 561 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 LCMT1Q9UIC8 334 aa18.16■□□□□ 0.5
CIRBP-227ENST00000590188 ANKRD36A6QL64 1941 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 SHROOM3Q8TF72 1996 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 LZTS3O60299 673 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-227ENST00000590188 KRT1P04264 644 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 DGKAP23743 735 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 MMP12P39900 470 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 MAGEA1P43355 309 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 LIG3P49916 1009 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 CLDN6P56747 220 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 GBE1Q04446 702 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 PAFAH1B3Q15102 231 aaKnown RBP18.15■□□□□ 0.5
CIRBP-227ENST00000590188 FAM182AQ5T1J6 154 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 DHRS13Q6UX07 377 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 UNQ6494/PRO21346Q6UXR6 183 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 SLC25A45Q8N413 288 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 ASB12Q8WXK4 309 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 NUDCD1Q96RS6 583 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 NOD2Q9HC29 1040 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 TTLL3Q9Y4R7 772 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 NEUROG3Q9Y4Z2 214 aa18.15■□□□□ 0.5
CIRBP-227ENST00000590188 SPEGQ15772 3267 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 SPTY2D1-AS1A0A0U1RR47 76 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 TRIM38O00635 465 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 TRAFD1O14545 582 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-227ENST00000590188 PIAS2O75928 621 aa18.14■□□□□ 0.49
CIRBP-227ENST00000590188 NEBLO76041 1014 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms